MirGeneDB 3.0

MirGeneDB ID

Aga-Mir-1890

Family name MIR-1890 (all species)
Seed GAAAUCU
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-1890
Paralogues
Orthologues Aae-Mir-1890 
Node of Origin (locus) Culicidae
Node of Origin (family) Culicidae
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)
NC_064602.1: 20853711-20853777 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGCACUUCCCGAUUGUCGUGUGGACGAUCAGAGCUAAUUGGAGUAUUUCUUGAGGAAUAUUUUUGACAAGCUCAUGAAAUCUUUGAUUAGGUCUGGUUGUUCGGUACGACCAGCGCUCUUCAAACG
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Structure
        10         20         30        40        50        60   
AAGCACUUCCCGAUUGU-    -|           G     UG   U     U  AGGAAUAUU 
                  CGUG UGGACGAUCAGA CUAAU  GAG AUUUC UG         U
                  GCAU GCUUGUUGGUCU GAUUA  UUC UAAAG AC         U
GCAAACUUCUCGCGACCA    G^           G     GU   -     U  UCGAACAGU 
     120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ab Ab He He Mi Mi Ov Ov Ov
Star sequence

Aga-Mir-1890_5p*

mirBase accessionNone
Sequence
0- AGAGCUAAUUGGAGUAUUUCUUG -23
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Mature sequence

Aga-Mir-1890_3p

mirBase accessionMIMAT0007861
Sequence
45- UGAAAUCUUUGAUUAGGUCUGG -67
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