MirGeneDB 2.1
MirGeneDB ID

Aae-Mir-31

Family name MIR-31 (all species)
Seed GGCAAGA
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-31
Paralogues
Orthologues Aca-Mir-31  Ami-Mir-31  Asu-Mir-31  Bfl-Mir-31  Bge-Mir-31  Bla-Mir-31  Bpl-Mir-31  Bta-Mir-31  Cbr-Mir-31  Cel-Mir-31  Cfa-Mir-31  Cgi-Mir-31  Cin-Mir-31  Cli-Mir-31  Cmi-Mir-31  Cpi-Mir-31  Cpo-Mir-31  Cte-Mir-31  Dan-Mir-31-P1  Dan-Mir-31-P2  Dma-Mir-31  Dme-Mir-31-P1  Dme-Mir-31-P2  Dmo-Mir-31-P1  Dmo-Mir-31-P2  Dno-Mir-31  Dpu-Mir-31  Dre-Mir-31  Dsi-Mir-31-P1  Dsi-Mir-31-P2  Dya-Mir-31-P1  Dya-Mir-31-P2  Ebu-Mir-31  Efe-Mir-31  Esc-Mir-31  Ete-Mir-31  Gga-Mir-31  Gja-Mir-31-P10  Gja-Mir-31-P11  Gja-Mir-31-P12  Gmo-Mir-31  Hme-Mir-31  Hsa-Mir-31  Isc-Mir-31  Lan-Mir-31-P6  Lan-Mir-31-P7  Lch-Mir-31  Lgi-Mir-31  Loc-Mir-31-P8  Loc-Mir-31-P9  Lpo-Mir-31-P13  Lpo-Mir-31-P14  Lpo-Mir-31-P15  Lpo-Mir-31-P16  Mal-Mir-31  Mdo-Mir-31  Mml-Mir-31  Mmu-Mir-31  Mun-Mir-31  Npo-Mir-31  Oan-Mir-31  Obi-Mir-31  Ocu-Mir-31  Ovu-Mir-31  Pbv-Mir-31  Pfl-Mir-31  Pmi-Mir-31-P3  Pmi-Mir-31-P4  Pmi-Mir-31-P5a  Pmi-Mir-31-P5b  Rno-Mir-31  Sha-Mir-31  Sko-Mir-31  Sme-Mir-31-P19  Sme-Mir-31-P20  Spt-Mir-31  Spu-Mir-31  Sto-Mir-31  Tca-Mir-31  Tgu-Mir-31  Tni-Mir-31  Xbo-Mir-31  Xla-Mir-31-P17  Xla-Mir-31-P18  Xtr-Mir-31 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Aaeg_L3)		 supercont1.636: 483222-483279 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCGUGUUUGCAGAGUGAAAUUGGCAACUUGGCAAGAUGUUGGCAUAGCUGAAAGUUUUGAGUUUAGCUAUUCAACUUCUUGUCUAUUUUUCCAAUUUAUUGACAACGAAGAGGCGU
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Structure
        10         20        30         40        50         
GGUCGUGUUUGCAGAGUG-       CAACUU-|      U     C         AGUU 
                   AAAUUGG       GGCAAGA GUUGG AUAGCUGAA    \
                   UUUAACC       CUGUUCU CAACU UAUCGAUUU    U
UGCGGAGAAGCAACAGUUA       UUUUUAU^      U     -         GAGU 
      110       100        90        80         70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
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Mature sequence

Aae-Mir-31_5p
mirBase accessionMIMAT0014276
Sequence 
0- UGGCAAGAUGUUGGCAUAGCUGAA -24
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Star sequence

Aae-Mir-31_3p*
mirBase accessionNone
Sequence 
35- UAGCUAUUCAACUUCUUGUCUAU -58
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