MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-2941-P2

Family name MIR-2941 (all species)
Seed AGUACGG
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-2941-1
Paralogues Aae-Mir-2941-P1 
Orthologues
Node of Origin (locus) A. aegypti
Node of Origin (family) A. aegypti
Genome context
(Aaeg_L3)		 supercont1.385: 413146-413210 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2941-P2)		 Mir-2941-P2 supercont1.385: 413146-413210 [-] Ensembl
Mir-2941-P1 supercont1.385: 413577-413638 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUUACAAUGGAUUAAGUUGUACCACUUUCGUGGUGUUUAGACGUAUUACAUGAUUUUUUGAACAUAACUGUAGUACGGCUAGAACUCCACGGAUGUUGGCAAUAUAGUCAUCGAGUUAAACCC
Get precursor sequence
Structure
        10           20        30         40        50        60 
AUGUUACAAUGGAUUAA---|    ACC  U       UG-     A         UGAUUUUU 
                    GUUGU   AC UUCGUGG   UUUAG CGUAUUACA        U
                    UAACG   UG AGGCACC   AGAUC GCAUGAUGU        G
CCCAAAUUGAGCUACUGAUA^    GU-  U       UCA     G         CAAUACAA 
   120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So To To To
Star sequence

Aae-Mir-2941-P2_5p*
mirBase accessionNone
Sequence 
0- CGUGGUGUUUAGACGUAUUACA -22
Get sequence
Mature sequence

Aae-Mir-2941-P2_3p
mirBase accessionMIMAT0014286
Sequence 
42- UAGUACGGCUAGAACUCCACGGA -65
Get sequence