MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-279-P25

Family name MIR-279 (all species)
Seed GACUAGA
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-2945
Paralogues Aae-Mir-279-P1a  Aae-Mir-279-P1b1  Aae-Mir-279-P1b2  Aae-Mir-279-P2  Aae-Mir-279-P3 
Orthologues Aga-Mir-279-P25  Agr-Mir-279  Asu-Mir-279-o25  Bpl-Mir-279  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gsa-Mir-279  Gsp-Mir-279  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279 
Node of Origin (locus) Culicidae
Node of Origin (family) Protostomia
Genome context
(Aaeg_L3)		 supercont1.43: 958696-958759 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGUUUCGUUUUAUUAUGAUUUUCUGAUCUGAGCGGGUCCGUUUCUAGUGUCAUGUGCUGUAUUCGAAUAUCAUGACUAGAGGCAGACUCGUUUAGGUCUGGGAUCGUUGUCUUCAGUUUGCUUA
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Structure
        10          20        30        40        50        60  
AGUUUCGUUUUAUUAUGAU--|UU U              C       GU      UGCUGUA 
                     U  C GAUCUGAGCGGGUC GUUUCUA  GUCAUG       U
                     A  G CUGGAUUUGCUCAG CGGAGAU  CAGUAC       U
AUUCGUUUGACUUCUGUUGCU^GG U              A       --      UAUAAGC 
  120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Aae-Mir-279-P25_5p*
mirBase accessionMIMAT0014315
Sequence 
0- AGCGGGUCCGUUUCUAGUGUCAUG -24
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Mature sequence

Aae-Mir-279-P25_3p
mirBase accessionMIMAT0014316
Sequence 
42- UGACUAGAGGCAGACUCGUUUA -64
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