MirGeneDB 3.0

MirGeneDB ID

Aae-Mir-279-P1b2

Family name MIR-279 (all species)
Seed GACUAGA
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-286b-2
Paralogues Aae-Mir-279-P1a  Aae-Mir-279-P1b1  Aae-Mir-279-P2  Aae-Mir-279-P3  Aae-Mir-279-P25 
Orthologues Aga-Mir-279-P1b  Agr-Mir-279  Bko-Mir-279-o1  Bpl-Mir-279  Dan-Mir-279-P1  Dlo-Mir-279-P1  Dme-Mir-279-P1  Dmo-Mir-279-P1  Dsi-Mir-279-P1  Dya-Mir-279-P1  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gpa-Mir-279-P1  Gsa-Mir-279  Gsp-Mir-279  Hme-Mir-279-o1  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279 
Node of Origin (locus) A. aegypti
Node of Origin (family) Protostomia
Genome context
(Aaeg_L3)
Precursor
(pre-Mir +30nt flank)
GGCGAUUGUCGGCUUAGUCGCUGUAUCAUUUCAACUGCUGUGCAGUUCUUCGCUAGUGACUAGACCGAACACUCGUAUC
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Structure
           10        20        30          
G--    U  -|   CU         UAUCAUUUC      U 
   GCGA UG UCGG  UAGUCGCUG         AACUGC \
   UGCU AC AGCC  AUCAGUGAU         UUGACG G
CUA    C  A^   AG         CGCUUC---      U 
        70        60        50
Deep sequencing
3' NTU No
MotifsNo
Star sequence

Aae-Mir-279-P1b2_5p*

mirBase accessionNone
Sequence
0- GGCGAUUGUCGGCUUAGUCGCU -22
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Mature sequence

Aae-Mir-279-P1b2_3p

mirBase accessionMIMAT0014313
Sequence
56- UGACUAGACCGAACACUCGUAUC -79
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