MirGeneDB 3.0

19 microRNA genes with node of origin Culicidae
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aae-Mir-2-P5a aae-mir-2944b MIR-2 AAGGAAC MIMAT0014304 MIMAT0015373 supercont1.602 93656 93722 + Culicidae Protostomia No
Aae-Mir-2-P5b aae-mir-2944b MIR-2 AAGGAAC MIMAT0014304 MIMAT0015373 supercont1.150 907506 907572 + Culicidae Protostomia No
Aga-Mir-2-P5b aga-mir-2944b MIR-2 AAGGAAC MIMAT0041507 MIMAT0041508 NC_064602.1 42670305 42670366 - Culicidae Protostomia No
Aga-Mir-3-o1 aga-mir-309 MIR-3 CACUGGG None MIMAT0010112 NC_064601.1 67177915 67177979 - Culicidae Pancrustacea No 1
Aae-Mir-3-o2 aae-mir-309b MIR-3 CACUGGG MIMAT0014319 MIMAT0014320 supercont1.464 825634 825696 + Culicidae Pancrustacea Unknown 1
Aga-Mir-3-o2 None MIR-3 CACUGGG None None NC_064602.1 42669953 42670018 - Culicidae Pancrustacea No 1
Aae-Mir-279-P1a aae-mir-286a MIR-279 GACUAGA None MIMAT0014314 supercont1.464 825007 825079 + Culicidae Protostomia Unknown 1
Aga-Mir-279-P1a aga-mir-286 MIR-279 GACUAGA None MIMAT0010110 NC_064602.1 42670645 42670715 - Culicidae Protostomia Unknown
Aga-Mir-279-P1b aga-mir-286b MIR-279 GACUAGA MIMAT0041566 MIMAT0041567 NC_064601.1 67178504 67178570 - Culicidae Protostomia Unknown 1 1
Aae-Mir-279-P25 aae-mir-2945 MIR-279 GACUAGA MIMAT0014315 MIMAT0014316 supercont1.43 958696 958759 + Culicidae Protostomia No 1
Aga-Mir-279-P25 aga-mir-2945 MIR-279 GACUAGA MIMAT0041515 MIMAT0041516 NC_064602.1 10240546 10240611 - Culicidae Protostomia No
Aae-Mir-1890 aae-mir-1890 MIR-1890 GAAAUCU None MIMAT0014247 supercont1.204 1733314 1733377 + Culicidae Culicidae No
Aga-Mir-1890 aga-mir-1890 MIR-1890 GAAAUCU None MIMAT0007861 NC_064602.1 20853711 20853777 - Culicidae Culicidae No
Aga-Mir-1891-v1 aga-mir-1891 MIR-1891 GAGGAGU MIMAT0007862 None NC_064602.1 5810731 5810788 - Culicidae Culicidae No 1
Aga-Mir-1891-v2 aga-mir-1891 MIR-1891 CACGUCC MIMAT0007862 None NC_064602.1 5810730 5810789 - Culicidae Culicidae No 1
Aae-Mir-2940-v1 aae-mir-2940 MIR-2940 GUCGACA MIMAT0014283 MIMAT0014284 supercont1.222 643960 644064 + Culicidae Culicidae No 1
Aga-Mir-2940-v1 None MIR-2940 GUCGACA None None NC_064600.1 2843245 2843310 - Culicidae Culicidae No 1
Aae-Mir-2940-v2 aae-mir-2940 MIR-2940 UCGACAG MIMAT0014283 MIMAT0014284 supercont1.222 643960 644064 + Culicidae Culicidae No 1
Aga-Mir-2940-v2 None MIR-2940 UCGACAG None None NC_064600.1 2843245 2843310 - Culicidae Culicidae No 1 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all