MirGeneDB 3.0
MirGeneDB ID

Aga-Mir-3-o1

Family name MIR-3 (all species)
Seed CACUGGG
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-309
Paralogues Aga-Mir-3-o2 
Orthologues Aae-Mir-3-o1a  Aae-Mir-3-o1b  Dan-Mir-3-P1  Dlo-Mir-3  Dma-Mir-3  Dme-Mir-3-P1  Dmo-Mir-3-P1  Dpu-Mir-3  Dsi-Mir-3-P1  Dya-Mir-3-P1  Gpa-Mir-3 
Node of Origin (locus) Culicidae
Node of Origin (family) Pancrustacea
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)		 NC_064601.1: 67177915-67177979 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-3-o1)		 Mir-3-o1 NC_064601.1: 67177915-67177979 [-] Ensembl
Mir-2-P5a2 NC_064601.1: 67178094-67178150 [-] Ensembl
Mir-279-P1b NC_064601.1: 67178504-67178570 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
ACGAAGAAGCGCGAGUCUACACAUCGUUAUGCGACUAACUUCGUUCAGGUGAUGUUCAUUAAGCAAAUUCCAUCACUGGGCAAAGUUUGUCGCAUAAACCAUUUCAAUAGCCACAACACAACCAU
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Structure
        10        20          30        40        50        60  
ACGAAGAAGCGCGAGUCUACACAUCG--|        U     C      G     UUCAUUA 
                            UUAUGCGAC AACUU GUUCAG UGAUG       A
                            AAUACGCUG UUGAA CGGGUC ACUAC       G
UACCAACACAACACCGAUAACUUUACCA^        U     A      -     CUUAAAC 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ab Ab He He Mi Mi Ov Ov Ov
Star sequence

Aga-Mir-3-o1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCGACUAACUUCGUUCAGGUGAUG -24
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Mature sequence

Aga-Mir-3-o1_3p
mirBase accessionMIMAT0010112
Sequence 
42- UCACUGGGCAAAGUUUGUCGCAU -65
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