Mir-2-P5a2

MirGeneDB ID

Aga-Mir-2-P5a2

Family name

MIR-2 (all species)

Seed

AAGGAAC

Species

African malaria mosquito (Anopheles gambiae)

MiRBase ID

aga-mir-2944a-2

Paralogues

Aga-Mir-2-P1-v1 Aga-Mir-2-P1-v2 Aga-Mir-2-P2a Aga-Mir-2-P2b Aga-Mir-2-P3 Aga-Mir-2-P4-v1 Aga-Mir-2-P4-v2 Aga-Mir-2-P5a1 Aga-Mir-2-P5b Aga-Mir-2-P7 Aga-Mir-2-P8

Orthologues

Aae-Mir-2-P5a Cel-Mir-2-o5 Dan-Mir-2-P5 Dlo-Mir-2-P5 Dma-Mir-2-P5 Dme-Mir-2-P5 Dmo-Mir-2-P5 Dpu-Mir-2-P5 Dsi-Mir-2-P5 Dya-Mir-2-P5 Gpa-Mir-2-P5-v1 Gpa-Mir-2-P5-v2 Gsp-Mir-2 Ple-Mir-2

Node of Origin (locus)

A. gambiae

Node of Origin (family)

Protostomia

Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)

NC_064601.1: 67178094-67178150 [-] Ensembl

Clustered miRNAs
(< 50kb from Mir-2-P5a2)

Mir-3-o1 NC_064601.1: 67177915-67177979 [-] Ensembl
Mir-2-P5a2 NC_064601.1: 67178094-67178150 [-] Ensembl
Mir-279-P1b NC_064601.1: 67178504-67178570 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

AGUAGAGUAAGGAACUAGGGUGUCAAUAUUGAAGGAACUUCUGCUGUGAUCUGAGUUAUAGAUCAUAUCACAGUAGUUGUACUUUAAUGUCGACAUAUCCAUUAGCAGCGAGGAUCG

Get precursor sequence

Structure

        10          20        30        40        50        
AGUAGAGUAAGGAACUAGG--|    A         GA  UU          CUGAGUU 
                     GUGUC AUAUUGAAG  AC  CUGCUGUGAU       A
                     UACAG UGUAAUUUC  UG  GAUGACACUA       U
GCUAGGAGCGACGAUUACCUA^    C         A-  UU          UACUAGA 
     110       100        90         80        70        60