MirGeneDB 3.0
MirGeneDB ID

Aga-Mir-2-P5a1

Family name MIR-2 (all species)
Seed AAGGAAC
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-2944a-1
Paralogues Aga-Mir-2-P1-v1  Aga-Mir-2-P1-v2  Aga-Mir-2-P2a  Aga-Mir-2-P2b  Aga-Mir-2-P3  Aga-Mir-2-P4-v1  Aga-Mir-2-P4-v2  Aga-Mir-2-P5a2  Aga-Mir-2-P5b  Aga-Mir-2-P7  Aga-Mir-2-P8 
Orthologues Aae-Mir-2-P5a  Cel-Mir-2-o5  Dan-Mir-2-P5  Dlo-Mir-2-P5  Dma-Mir-2-P5  Dme-Mir-2-P5  Dmo-Mir-2-P5  Dpu-Mir-2-P5  Dsi-Mir-2-P5  Dya-Mir-2-P5  Gpa-Mir-2-P5-v1  Gpa-Mir-2-P5-v2  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) A. gambiae
Node of Origin (family) Protostomia
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)		 NC_064602.1: 42670118-42670173 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P5a1)		 Mir-2-P5a1 NC_064602.1: 42670118-42670173 [-] Ensembl
Mir-2-P5b NC_064602.1: 42670305-42670366 [-] Ensembl
Mir-279-P1a NC_064602.1: 42670645-42670715 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUAUUUACAAGCCCUGGGCGUCUACAUUGAAGGAACUUCUGCUGUGAUCUGAGUUAGGAUCAUAUCACAGUAGUUGUACUUUAAUGUCGGCACUUCCCACAAUCAUCGACGAUG
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Structure
        10          20        30        40        50        
UCAUAUUUACAAGCCCU--|  C   U         GA  UU          CUGAGUU 
                   GGG GUC ACAUUGAAG  AC  CUGCUGUGAU       \
                   UUC CGG UGUAAUUUC  UG  GAUGACACUA       A
GUAGCAGCUACUAACACCC^  A   C         A-  UU          UACUAGG 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr Sr Sr Sr
Mature sequence

Aga-Mir-2-P5a1_5p
mirBase accessionMIMAT0041503
Sequence 
0- GAAGGAACUUCUGCUGUGAUCU -22
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Star sequence

Aga-Mir-2-P5a1_3p* (predicted)
mirBase accessionMIMAT0041504
Sequence 
36- UCACAGUAGUUGUACUUUAA -56
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