MirGeneDB 3.0

13 microRNA genes with seed AAGGAAC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Dan-Mir-2-P5 dan-mir-5 MIR-2 AAGGAAC MIMAT0008457 None scaffold_13266 9731684 9731747 + Pancrustacea Protostomia No
Dme-Mir-2-P5 dme-mir-5 MIR-2 AAGGAAC MIMAT0000110 MIMAT0020786 2R 19661162 19661222 - Pancrustacea Protostomia No 1
Dmo-Mir-2-P5 dmo-mir-5 MIR-2 AAGGAAC MIMAT0008691 None scaffold_6496 20936468 20936531 - Pancrustacea Protostomia No 1
Dsi-Mir-2-P5 dsi-mir-5 MIR-2 AAGGAAC MIMAT0008890 None 2R 16151011 16151070 - Pancrustacea Protostomia No 1
Dya-Mir-2-P5 dya-mir-5 MIR-2 AAGGAAC MIMAT0009101 None 2R 13624064 13624124 + Pancrustacea Protostomia No 1
Gpa-Mir-2-P5-v1 None MIR-2 AAGGAAC None None Scaffold26 90896 90954 + Pancrustacea Protostomia No 1
Aae-Mir-2-P5a aae-mir-2944b MIR-2 AAGGAAC MIMAT0014304 MIMAT0015373 supercont1.602 93656 93722 + Culicidae Protostomia No
Aga-Mir-2-P5a1 aga-mir-2944a-1 MIR-2 AAGGAAC MIMAT0041503 MIMAT0041504 NC_064602.1 42670118 42670173 - A. gambiae Protostomia No 1
Aga-Mir-2-P5a2 aga-mir-2944a-2 MIR-2 AAGGAAC MIMAT0041503 MIMAT0041504 NC_064601.1 67178094 67178150 - A. gambiae Protostomia No
Aae-Mir-2-P5b aae-mir-2944b MIR-2 AAGGAAC MIMAT0014304 MIMAT0015373 supercont1.150 907506 907572 + Culicidae Protostomia No
Aga-Mir-2-P5b aga-mir-2944b MIR-2 AAGGAAC MIMAT0041507 MIMAT0041508 NC_064602.1 42670305 42670366 - Culicidae Protostomia No
Tca-Mir-2-P5d tca-mir-2944b MIR-2 AAGGAAC MIMAT0018746 MIMAT0018747 LG5 7455840 7455901 + T. castaneum Protostomia No 1
Cin-Mir-4067 cin-mir-4067 MIR-4067 AAGGAAC MIMAT0016622 MIMAT0016623 1 1240455 1240513 + C. intestinalis C. intestinalis No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all