MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-2-P5

Family name MIR-2 (all species)
Seed AUCACAG
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues Dma-Mir-2-o2  Dma-Mir-2-P1  Dma-Mir-2-P2  Dma-Mir-2-P3  Dma-Mir-2-P4 
Orthologues Aae-Mir-2-P5a  Aae-Mir-2-P5b  Aga-Mir-2-P5a1  Aga-Mir-2-P5a2  Aga-Mir-2-P5b  Cel-Mir-2-o5  Dan-Mir-2-P5  Dlo-Mir-2-P5  Dme-Mir-2-P5  Dmo-Mir-2-P5  Dpu-Mir-2-P5  Dsi-Mir-2-P5  Dya-Mir-2-P5  Gpa-Mir-2-P5-v1  Gpa-Mir-2-P5-v2  Gsp-Mir-2  Ple-Mir-2  Tca-Mir-2-P5c  Tca-Mir-2-P5d  Tca-Mir-2-P5e 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Protostomia
Genome context
(DMA_ASM399081)		 NC_046175.1: 6286723-6286816 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUGUUUUUCAACAUAGAGUAACGGGACCUAGGAACUACCGCUUGUGGUUGAUUGAAUUGUCGAUUUUUUUAAAUUCUAAUCGGUUCAAUUGUCUUAUUUCUAUCACAGUCGUAGUUACUAGAUACCGAAGCUCUUCCGUCUCACUCACACAG
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Structure
        10          20        30        40        50        60        70       
AUAUGUUUUUCAACAUA--|   AA   GAC    G      C   U     U  UUGAAUUGUCGAUUUUUUUAAAU 
                   GAGU  CGG   CUAG AACUAC GCU GUGGU GA                       \
                   CUCG  GCC   GAUC UUGAUG UGA CACUA CU                       U
GACACACUCACUCUGCCUU^   AA   AUA    A      C   -     U  UUAUUCUGUUAACUUGGCUAAUC 
  150       140       130       120       110        100        90        80
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Star sequence

Dma-Mir-2-P5_5p*
mirBase accessionNone
Sequence 
0- UAGGAACUACCGCUUGUGGUUGA -23
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Mature sequence

Dma-Mir-2-P5_3p
mirBase accessionNone
Sequence 
72- UAUCACAGUCGUAGUUACUAGA -94
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