MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-2-P2

Family name MIR-2 (all species)
Seed AUCACAG
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues Dma-Mir-2-o2  Dma-Mir-2-P1  Dma-Mir-2-P3  Dma-Mir-2-P4  Dma-Mir-2-P5 
Orthologues Aae-Mir-2-P2b  Aga-Mir-2-P2a  Aga-Mir-2-P2b  Bge-Mir-2-P2a  Bge-Mir-2-P2b  Csc-Mir-2-P2n  Csc-Mir-2-P2o  Dan-Mir-2-P2a  Dan-Mir-2-P2b1  Dan-Mir-2-P2b2  Dlo-Mir-2-P2a  Dlo-Mir-2-P2b  Dme-Mir-2-P2a  Dme-Mir-2-P2b1  Dme-Mir-2-P2b2  Dmo-Mir-2-P2a  Dmo-Mir-2-P2b1  Dmo-Mir-2-P2b2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2a  Dsi-Mir-2-P2b1  Dsi-Mir-2-P2b2  Dya-Mir-2-P2a  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Gpa-Mir-2-P2a  Gpa-Mir-2-P2b  Gsp-Mir-2  Hme-Mir-2-P2a  Hme-Mir-2-P2b  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Ple-Mir-2  Tca-Mir-2-P2a  Tca-Mir-2-P2b 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Protostomia
Genome context
(DMA_ASM399081)		 NC_046175.1: 11973770-11973832 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGGCGACAAAGAAACGACAUUUGCGCCGCUCGUCGGAAAGGCUGUGGUGUGUUGCUAUUACAUAAUUUUCAUAUCACAGCCAUUCUAGAUGCGCGGAGCUGCCGGAAUAACUCAAAACCCUUG
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Structure
        10        20          30         40        50        60
CGGCGACAAAGAAACGACAUUU--  G    U    -|   A            UUGCUAUU 
                        GC CCGC CGUC GGAA GGCUGUGGUGUG        A
                        CG GGCG GUAG UCUU CCGACACUAUAC        C
GUUCCCAAAACUCAAUAAGGCCGU  A    C    A^   A            UUUUAAUA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Star sequence

Dma-Mir-2-P2_5p*
mirBase accessionNone
Sequence 
0- CGUCGGAAAGGCUGUGGUGUG -21
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Mature sequence

Dma-Mir-2-P2_3p
mirBase accessionNone
Sequence 
41- UAUCACAGCCAUUCUAGAUGCG -63
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