MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-2-P2a

Family name MIR-2 (all species)
Seed AUCACAG
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gpa-Mir-2-P2b  Gpa-Mir-2-P3a  Gpa-Mir-2-P3b  Gpa-Mir-2-P4a-v1  Gpa-Mir-2-P4a-v2  Gpa-Mir-2-P4b-v1  Gpa-Mir-2-P4b-v2  Gpa-Mir-2-P5-v1  Gpa-Mir-2-P5-v2  Gpa-Mir-2-P6  Gpa-Mir-2-P7  Gpa-Mir-2-P8  Gpa-Mir-2-P9 
Orthologues Aga-Mir-2-P2a  Bge-Mir-2-P2a  Dan-Mir-2-P2a  Dlo-Mir-2-P2a  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2a  Dmo-Mir-2-P2a  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2a  Dya-Mir-2-P2a  Gsp-Mir-2  Hme-Mir-2-P2a  Ple-Mir-2  Tca-Mir-2-P2a 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(GpalI1)		 Scaffold379: 73449-73516 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUUGUGAUUAUUAAAAAAUUCUUGCGUAACUCUUCAAGAUGUUGUGAAAUGUCGCUUUGGAAUUUUUCAAUUCAUAUCACAGCCAUUUUGAUGAGUUAUAUGGGAAUUACUUGAAACGCAUCUCAAC
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Structure
        10          20        30        40         50        60   
CUUUGUGAUUAUUAAAA--       GC       U       -|      A   UCGCUUUGGA 
                   AAUUCUU  GUAACUC UCAAGAU GUUGUGA AUG          \
                   UUAAGGG  UAUUGAG AGUUUUA CGACACU UAC          A
CAACUCUACGCAAAGUUCA       UA       U       C^      A   UUAACUUUUU 
      120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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Star sequence

Gpa-Mir-2-P2a_5p*
mirBase accessionNone
Sequence 
0- CUCUUCAAGAUGUUGUGAAAUG -22
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Mature sequence

Gpa-Mir-2-P2a_3p
mirBase accessionNone
Sequence 
45- UAUCACAGCCAUUUUGAUGAGUU -68
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