MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-2-P7

Family name MIR-2 (all species)
Seed AUCACAG
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gpa-Mir-2-P2a  Gpa-Mir-2-P2b  Gpa-Mir-2-P3a  Gpa-Mir-2-P3b  Gpa-Mir-2-P4a-v1  Gpa-Mir-2-P4a-v2  Gpa-Mir-2-P4b-v1  Gpa-Mir-2-P4b-v2  Gpa-Mir-2-P5-v1  Gpa-Mir-2-P5-v2  Gpa-Mir-2-P6  Gpa-Mir-2-P8  Gpa-Mir-2-P9 
Orthologues Aae-Mir-2-P7  Aga-Mir-2-P7  Asu-Mir-2-o7a  Asu-Mir-2-o7b  Bge-Mir-2-P7  Dan-Mir-2-P7  Dlo-Mir-2-P7  Dme-Mir-2-P7  Dmo-Mir-2-P7  Dsi-Mir-2-P7  Dya-Mir-2-P7  Gsp-Mir-2  Hme-Mir-2-P7  Ple-Mir-2  Tca-Mir-2-P7 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(GpalI1)		 Scaffold391: 37678-37806 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUUUUACAAAAUCAACGAGUCACGCUUGUCGAGAGCUCUGUCUGUGAUUUGCGUUCUUUAGCGCGCAAUGGUAACCGACUGUUGUGUUCUUUUAGUUGAAAGAAUGCCCAGCCAAAUGCCAUCCAUAACAUAUUCGCAUCACAGUCUGAGUUCUUGCUGAGCGUGCAUUCUGCAGCAGCAUACAAACA
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Structure
        10         20         30        40        50        60        70        80        90     
CAUUUUACAAAAUCAAC-    -|       U         UGU      UU    UUCUUUAGCGCGCAAUGGUAACCGACUGUUGUGUUCUUUU 
                  GAGU CACGCUUG CGAGAGCUC   CUGUGA  UGCG                                        \
                  CUUA GUGCGAGU GUUCUUGAG   GACACU  ACGC                                        A
ACAAACAUACGACGACGU    C^       C         UCU      --    UUAUACAAUACCUACCGUAAACCGACCCGUAAGAAAGUUG 
       180       170       160       150       140         130       120       110       100
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Star sequence

Gpa-Mir-2-P7_5p*
mirBase accessionNone
Sequence 
0- CGAGAGCUCUGUCUGUGAUUUGCG -24
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Mature sequence

Gpa-Mir-2-P7_3p
mirBase accessionNone
Sequence 
107- CAUCACAGUCUGAGUUCUUGCU -129
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