MirGeneDB 3.0
MirGeneDB ID

Asu-Mir-2-o7b

Family name MIR-2 (all species)
Seed AUCACAG
Species Large roundworm (Ascaris suum)
MiRBase ID
Paralogues Asu-Mir-2-o6  Asu-Mir-2-o7a  Asu-Mir-2-o8  Asu-Mir-2-o9  Asu-Mir-2-o10  Asu-Mir-2-o11a  Asu-Mir-2-o11b  Asu-Mir-2-o11c  Asu-Mir-2-o11d  Asu-Mir-2-P11 
Orthologues Aae-Mir-2-P7  Aga-Mir-2-P7  Bge-Mir-2-P7  Dan-Mir-2-P7  Dlo-Mir-2-P7  Dme-Mir-2-P7  Dmo-Mir-2-P7  Dsi-Mir-2-P7  Dya-Mir-2-P7  Gpa-Mir-2-P7  Gsp-Mir-2  Hme-Mir-2-P7  Ple-Mir-2  Tca-Mir-2-P7 
Node of Origin (locus) A.suum
Node of Origin (family) Protostomia
Genome context
(ASU_PRJNA80881_plustraces)		 Scaffold2380: 4192-4249 [+]
Precursor
(pre-Mir +30nt flank)
GAUUUCGACGGGCACAAGGCCGUUCCAGCACGUCAAAGUGGUGGUGAUGUGUUGGGGAUAAGCUCAUAUCACAGCCAGCUUUGAUGUGCUGUGGCAGUCAGUCGCCCUCUCACUCGUU
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Structure
        10          20        30         40        50        
GAUUUCGACGGGCACAA--   C  UC             -|   G        UUGGGG 
                   GGC GU  CAGCACGUCAAAG UGGU GUGAUGUG      \
                   CUG CG  GUCGUGUAGUUUC ACCG CACUAUAC      A
UUGCUCACUCUCCCGCUGA   A  GU             G^   A        UCGAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ce Em Em Em Em Em Em Em Em Em Em La Ov Se Sp Te Zy
Star sequence

Asu-Mir-2-o7b_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGUCAAAGUGGUGGUGAUGUG -21
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Mature sequence

Asu-Mir-2-o7b_3p
mirBase accessionNone
Sequence 
36- UAUCACAGCCAGCUUUGAUGUG -58
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