Mir-2-P7

MirGeneDB ID

Aga-Mir-2-P7

Family name

MIR-2 (all species)

Seed

AUCACAG

Species

African malaria mosquito (Anopheles gambiae)

MiRBase ID

aga-mir-11

Paralogues

Aga-Mir-2-P1-v1 Aga-Mir-2-P1-v2 Aga-Mir-2-P2a Aga-Mir-2-P2b Aga-Mir-2-P3 Aga-Mir-2-P4-v1 Aga-Mir-2-P4-v2 Aga-Mir-2-P5a1 Aga-Mir-2-P5a2 Aga-Mir-2-P5b Aga-Mir-2-P8

Orthologues

Aae-Mir-2-P7 Asu-Mir-2-o7a Asu-Mir-2-o7b Bge-Mir-2-P7 Dan-Mir-2-P7 Dlo-Mir-2-P7 Dme-Mir-2-P7 Dmo-Mir-2-P7 Dsi-Mir-2-P7 Dya-Mir-2-P7 Gpa-Mir-2-P7 Gsp-Mir-2 Hme-Mir-2-P7 Ple-Mir-2 Tca-Mir-2-P7

Node of Origin (locus)

Neoptera

Node of Origin (family)

Protostomia

Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)

NC_064601.1: 12768536-12768611 [+] Ensembl

Clustered miRNAs
(< 50kb from Mir-2-P7)

Mir-2-P7 NC_064601.1: 12768536-12768611 [+] Ensembl
Mir-29-P2h NC_064601.1: 12768908-12768978 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

GAGGAGCUUCGAUUAGCGAGUUGCAUCCGGCAAGAACUUGGAACUGUGAUCUGUGUGGUUAUUAGCCGCGUUCGAAGCUCUUCACAUCACAGUCUGAGUUCUUGCUCGAUGGUUCGCACCGUCAUCCGAACGUUAG

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Structure

        10            20        30        40        50        60         
GAGGAGCUUCGAUUAGC----|  UUG    C          UG  A      UC    UGGUUAUUAGCCG 
                     GAG   CAUC GGCAAGAACU  GA CUGUGA  UGUG             \
                     CUU   GUAG UCGUUCUUGA  CU GACACU  ACAC             C
GAUUGCAAGCCUACUGCCACG^  G--    C          GU  -      --    UUCUCGAAGCUUG 
    130       120         110       100         90          80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ab	Ab	He	He	Mi	Mi	Ov	Ov	Ov

Star sequence

Aga-Mir-2-P7_5p*

mirBase accession

None

Sequence

0- CAAGAACUUGGAACUGUGAUCUGUG -25

Get sequence

Mature sequence

Aga-Mir-2-P7_3p

mirBase accession

MIMAT0007856

Sequence

54- CAUCACAGUCUGAGUUCUUGCU -76

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