MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-2-P7

Family name MIR-2 (all species)
Seed AUCACAG
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-2-P1-v1  Dlo-Mir-2-P1-v2  Dlo-Mir-2-P2a  Dlo-Mir-2-P2b  Dlo-Mir-2-P3-v1  Dlo-Mir-2-P3-v2  Dlo-Mir-2-P5 
Orthologues Aae-Mir-2-P7  Aga-Mir-2-P7  Asu-Mir-2-o7a  Asu-Mir-2-o7b  Bge-Mir-2-P7  Dan-Mir-2-P7  Dme-Mir-2-P7  Dmo-Mir-2-P7  Dsi-Mir-2-P7  Dya-Mir-2-P7  Gpa-Mir-2-P7  Gsp-Mir-2  Hme-Mir-2-P7  Ple-Mir-2  Tca-Mir-2-P7 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087240.1: 4816592-4816653 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAACGUUAUGGUACAGUGGCUGUUCCCUAUCGGAACUCUGACUGUGACUUGUGUAGUGUCUUUAAUAUCACAUCACAGGCAGAGUUCUAGUUAGGUGACUGUCCCCAACGACGAUUUUAAUU
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Structure
        10          20        30         40        50        60 
CAACGUUAUGGUACAGU--   U  UC    UC-|        A      CU    UAGUGUC 
                   GGC GU  CCUA   GGAACUCUG CUGUGA  UGUG       \
                   CUG CA  GGAU   UCUUGAGAC GACACU  ACAC       U
UUAAUUUUAGCAGCAACCC   U  GU    UGA^        G      --    UAUAAUU 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Sr Sr
Star sequence

Dlo-Mir-2-P7_5p*

mirBase accessionNone
Sequence
0- CGGAACUCUGACUGUGACUUGUG -23
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Mature sequence

Dlo-Mir-2-P7_3p

mirBase accessionNone
Sequence
40- CAUCACAGGCAGAGUUCUAGUU -62
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