MirGeneDB ID | Dlo-Mir-2-P7 |
Family name |
MIR-2 (all species) |
Seed |
AUCACAG |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Mir-2-P1-v1
Dlo-Mir-2-P1-v2
Dlo-Mir-2-P2a
Dlo-Mir-2-P2b
Dlo-Mir-2-P3-v1
Dlo-Mir-2-P3-v2
Dlo-Mir-2-P5
|
Orthologues |
Aae-Mir-2-P7
Aga-Mir-2-P7
Asu-Mir-2-o7a
Asu-Mir-2-o7b
Bge-Mir-2-P7
Dan-Mir-2-P7
Dme-Mir-2-P7
Dmo-Mir-2-P7
Dsi-Mir-2-P7
Dya-Mir-2-P7
Gpa-Mir-2-P7
Gsp-Mir-2
Hme-Mir-2-P7
Ple-Mir-2
Tca-Mir-2-P7
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Protostomia
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087240.1: 4816592-4816653 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAACGUUAUGGUACAGUGGCUGUUCCCUAUCGGAACUCUGACUGUGACUUGUGUAGUGUCUUUAAUAUCACAUCACAGGCAGAGUUCUAGUUAGGUGACUGUCCCCAACGACGAUUUUAAUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAACGUUAUGGUACAGU-- U UC UC-| A CU UAGUGUC
GGC GU CCUA GGAACUCUG CUGUGA UGUG \
CUG CA GGAU UCUUGAGAC GACACU ACAC U
UUAAUUUUAGCAGCAACCC U GU UGA^ G -- UAUAAUU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dlo-Mir-2-P7_5p* |
mirBase accession | None |
Sequence |
0- CGGAACUCUGACUGUGACUUGUG -23
Get sequence
|
Mature sequence |
Dlo-Mir-2-P7_3p |
mirBase accession | None |
Sequence |
40- CAUCACAGGCAGAGUUCUAGUU -62
Get sequence
|