MirGeneDB ID | Dlo-Mir-2-P2b |
Family name |
MIR-2 (all species) |
Seed |
AUCACAG |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Mir-2-P1-v1
Dlo-Mir-2-P1-v2
Dlo-Mir-2-P2a
Dlo-Mir-2-P3-v1
Dlo-Mir-2-P3-v2
Dlo-Mir-2-P5
Dlo-Mir-2-P7
|
Orthologues |
Aae-Mir-2-P2b
Aga-Mir-2-P2b
Bge-Mir-2-P2b
Dan-Mir-2-P2b1
Dan-Mir-2-P2b2
Dma-Mir-2-o2
Dma-Mir-2-P2
Dme-Mir-2-P2b1
Dme-Mir-2-P2b2
Dmo-Mir-2-P2b1
Dmo-Mir-2-P2b2
Dpu-Mir-2-o2
Dpu-Mir-2-P2
Dsi-Mir-2-P2b1
Dsi-Mir-2-P2b2
Dya-Mir-2-P2b1
Dya-Mir-2-P2b2
Gpa-Mir-2-P2b
Gsp-Mir-2
Hme-Mir-2-P2b
Ple-Mir-2
Tca-Mir-2-P2b
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Protostomia
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087235.1: 3200200-3200258 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAUACUCCGUAAGGAGGAAACGCGAUCCAAUCGUCAAAAUGGUUGUGACGUGUUGUUUACUCUCAUAUCACAGCCAUUUUUGACAAGUUGGAUCGCCGUUUUUAACGUCAGCCAGGAUA
Get precursor sequence
|
Structure | 10 20 30 40 50
AAUACUCCGUAAGGAGG- - C- -| CG UUGUU
AAAC GCGAUCCAAU GUC AAAAUGGUUGUGA UG \
UUUG CGCUAGGUUG CAG UUUUACCGACACU AC U
AUAGGACCGACUGCAAUU C AA U^ AU UCUCA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dlo-Mir-2-P2b_5p* |
mirBase accession | None |
Sequence |
0- UCGUCAAAAUGGUUGUGACGUG -22
Get sequence
|
Mature sequence |
Dlo-Mir-2-P2b_3p |
mirBase accession | None |
Sequence |
35- UAUCACAGCCAUUUUUGACAAGUU -59
Get sequence
|