MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-2-P2b1

Family name MIR-2 (all species)
Seed AUCACAG
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-13b-1
Paralogues Dsi-Mir-2-P1-v1  Dsi-Mir-2-P1-v2  Dsi-Mir-2-P2a  Dsi-Mir-2-P2b2  Dsi-Mir-2-P3a  Dsi-Mir-2-P3b  Dsi-Mir-2-P4a-v1  Dsi-Mir-2-P4a-v2  Dsi-Mir-2-P4b-v1  Dsi-Mir-2-P4b-v2  Dsi-Mir-2-P5  Dsi-Mir-2-P6a  Dsi-Mir-2-P6b  Dsi-Mir-2-P6c  Dsi-Mir-2-P7  Dsi-Mir-2-P8  Dsi-Mir-2-P9-v1  Dsi-Mir-2-P9-v2 
Orthologues Aae-Mir-2-P2b  Aga-Mir-2-P2b  Bge-Mir-2-P2b  Dan-Mir-2-P2b1  Dlo-Mir-2-P2b  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2b1  Dmo-Mir-2-P2b1  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dya-Mir-2-P2b1  Gpa-Mir-2-P2b  Gsp-Mir-2  Hme-Mir-2-P2b  Ple-Mir-2  Tca-Mir-2-P2b 
Node of Origin (locus) Drosophila
Node of Origin (family) Protostomia
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 3R: 9985663-9985722 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P2b1)		 Mir-2-P1-v1 3R: 9985314-9985380 [+] UCSC Ensembl
Mir-2-P1-v2 3R: 9985314-9985380 [+] UCSC Ensembl
Mir-2-P2a 3R: 9985528-9985590 [+] UCSC Ensembl
Mir-2-P2b1 3R: 9985663-9985722 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGACUGAACCGCGUCUUUCUUAUACCAUGUCGUUAAAAUGUUUGUGAACUUAUGUAUUCGCAAUCAUAUCACAGCCAUUUUGACGAGUUUGGGUAAAGAAAUCUCAACAUUAAGCGGAU
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Structure
        10          20        30          40        50        60
CCGACUGAACCGCGUCU--     A    AUG--|          U      ACU    UAUU 
                   UUCUU UACC     UCGUUAAAAUG UUGUGA   UAUG    C
                   AAGAA AUGG     AGCAGUUUUAC GACACU   AUAC    G
UAGGCGAAUUACAACUCUA     -    GUUUG^          C      ---    UAAC 
.       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Wh
Star sequence

Dsi-Mir-2-P2b1_5p*
mirBase accessionNone
Sequence 
0- UCGUUAAAAUGUUUGUGAACUUAUG -25
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Mature sequence

Dsi-Mir-2-P2b1_3p
mirBase accessionMIMAT0008845
Sequence 
37- UAUCACAGCCAUUUUGACGAGUU -60
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