MirGeneDB 3.0

MirGeneDB ID

Dsi-Mir-2-P7

Family name MIR-2 (all species)
Seed AUCACAG
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-11
Paralogues Dsi-Mir-2-P1-v1  Dsi-Mir-2-P1-v2  Dsi-Mir-2-P2a  Dsi-Mir-2-P2b1  Dsi-Mir-2-P2b2  Dsi-Mir-2-P3a  Dsi-Mir-2-P3b  Dsi-Mir-2-P4a-v1  Dsi-Mir-2-P4a-v2  Dsi-Mir-2-P4b-v1  Dsi-Mir-2-P4b-v2  Dsi-Mir-2-P5  Dsi-Mir-2-P6a  Dsi-Mir-2-P6b  Dsi-Mir-2-P6c  Dsi-Mir-2-P8  Dsi-Mir-2-P9-v1  Dsi-Mir-2-P9-v2 
Orthologues Aae-Mir-2-P7  Aga-Mir-2-P7  Asu-Mir-2-o7a  Asu-Mir-2-o7b  Bge-Mir-2-P7  Dan-Mir-2-P7  Dlo-Mir-2-P7  Dme-Mir-2-P7  Dmo-Mir-2-P7  Dya-Mir-2-P7  Gpa-Mir-2-P7  Gsp-Mir-2  Hme-Mir-2-P7  Ple-Mir-2  Tca-Mir-2-P7 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)
3R: 3864432-3864492 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCAUUUAGAUCUCCAUGAGGCGCACUUGUCAAGAACUUUCUCUGUGACCCGCGUGUACUUAAAAGCCGCAUCACAGUCUGAGUUCUUGCUGAGUGCGAAAUCCUCGAAGCAACAUUAAGC
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Structure
        10         20         30        40        50          
UGCAUUUAGAUCUCCAU-  GG-|       U         UCU      CC  CGUGUAC 
                  GA   CGCACUUG CAAGAACUU   CUGUGA  CG       \
                  CU   GCGUGAGU GUUCUUGAG   GACACU  GC       U
CGAAUUACAACGAAGCUC  AAA^       C         UCU      AC  CGAAAAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
He Wh
Star sequence

Dsi-Mir-2-P7_5p*

mirBase accessionNone
Sequence
0- CAAGAACUUUCUCUGUGACCCG -22
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Mature sequence

Dsi-Mir-2-P7_3p

mirBase accessionMIMAT0008865
Sequence
39- CAUCACAGUCUGAGUUCUUGCU -61
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