MirGeneDB 3.0

MirGeneDB ID

Dya-Mir-2-P7

Family name MIR-2 (all species)
Seed AUCACAG
Species Fruit fly (Drosophila yakuba)
MiRBase ID dya-mir-11
Paralogues Dya-Mir-2-P1-v1  Dya-Mir-2-P1-v2  Dya-Mir-2-P2a  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Dya-Mir-2-P3a  Dya-Mir-2-P3b  Dya-Mir-2-P4a-v1  Dya-Mir-2-P4a-v2  Dya-Mir-2-P4b-v1  Dya-Mir-2-P4b-v2  Dya-Mir-2-P5  Dya-Mir-2-P6a  Dya-Mir-2-P6b  Dya-Mir-2-P6c  Dya-Mir-2-P8  Dya-Mir-2-P9-v1  Dya-Mir-2-P9-v2 
Orthologues Aae-Mir-2-P7  Aga-Mir-2-P7  Asu-Mir-2-o7a  Asu-Mir-2-o7b  Bge-Mir-2-P7  Dan-Mir-2-P7  Dlo-Mir-2-P7  Dme-Mir-2-P7  Dmo-Mir-2-P7  Dsi-Mir-2-P7  Gpa-Mir-2-P7  Gsp-Mir-2  Hme-Mir-2-P7  Ple-Mir-2  Tca-Mir-2-P7 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
3R: 6285780-6285840 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCAUUAGUUCUCCAUGAGGCGCACUUGUCAAGAACUUUCUCUGUGACCUGCGUGUACUUAAAAGCCGCAUCACAGUCUGAGUUCUUGCUGAGCGCGAAAUCCUCAAAGCAACAUAAAGC
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Structure
        10         20         30        40        50        60 
UGCCAUUAGUUCUCCAU-  GG-|  A    U         UCU      CC  CGUGUACU 
                  GA   CGC CUUG CAAGAACUU   CUGUGA  UG        \
                  CU   GCG GAGU GUUCUUGAG   GACACU  AC        U
CGAAAUACAACGAAACUC  AAA^  C    C         UCU      --  GCCGAAAA 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-2-P7_5p*

mirBase accessionNone
Sequence
0- CAAGAACUUUCUCUGUGACCUG -22
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Mature sequence

Dya-Mir-2-P7_3p

mirBase accessionMIMAT0009123
Sequence
39- CAUCACAGUCUGAGUUCUUGCU -61
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