MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-2-P3b

Family name MIR-2 (all species)
Seed AUCACAG
Species Fruit fly (Drosophila yakuba)
MiRBase ID dya-mir-2b-2
Paralogues Dya-Mir-2-P1-v1  Dya-Mir-2-P1-v2  Dya-Mir-2-P2a  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Dya-Mir-2-P3a  Dya-Mir-2-P4a-v1  Dya-Mir-2-P4a-v2  Dya-Mir-2-P4b-v1  Dya-Mir-2-P4b-v2  Dya-Mir-2-P5  Dya-Mir-2-P6a  Dya-Mir-2-P6b  Dya-Mir-2-P6c  Dya-Mir-2-P7  Dya-Mir-2-P8  Dya-Mir-2-P9-v1  Dya-Mir-2-P9-v2 
Orthologues Aae-Mir-2-P3  Bge-Mir-2-P3  Cbr-Mir-2-o3  Cel-Mir-2-o3  Dan-Mir-2-P3b  Dma-Mir-2-P3  Dme-Mir-2-P3b  Dmo-Mir-2-P3b  Dpu-Mir-2-P3  Dsi-Mir-2-P3b  Hme-Mir-2-P3-v1  Hme-Mir-2-P3-v2  Isc-Mir-2-P3  Tca-Mir-2-P3-v1  Tca-Mir-2-P3-v2 
Node of Origin (locus) Drosophila
Node of Origin (family) Protostomia
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
2R: 6067230-6067298 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P3b)
Mir-2-P4b-v1 2R: 6066569-6066628 [-] UCSC Ensembl
Mir-2-P4b-v2 2R: 6066569-6066628 [-] UCSC Ensembl
Mir-2-P4a-v1 2R: 6066959-6067024 [-] UCSC Ensembl
Mir-2-P4a-v2 2R: 6066959-6067024 [-] UCSC Ensembl
Mir-2-P3b 2R: 6067230-6067298 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUCAAAUCGAAGCAAGAGAAUUGUGUCAUUCUUCAAAGUGGUUGUGAAAUGUUUGCCUUUUUCUGCCUAUUCAUAUCACAGCCAGCUUUGAGGAGCGACGCGAUGCUCAAGACAAAAAAAAUCGCAA
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Structure
        10          20        30        40         50        60   
UCAUCAAAUCGAAGCAA--   A        A          -|        A   UUUGCCUUU 
                   GAG AUUGUGUC UUCUUCAAAG UGGUUGUGA AUG         U
                   CUC UAGCGCAG GAGGAGUUUC ACCGACACU UAC         U
AACGCUAAAAAAAACAGAA   G        C          G^        A   UUAUCCGUC 
       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-2-P3b_5p*

mirBase accessionNone
Sequence
0- UUCUUCAAAGUGGUUGUGAAAUG -23
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Mature sequence

Dya-Mir-2-P3b_3p

mirBase accessionMIMAT0009075
Sequence
45- UAUCACAGCCAGCUUUGAGGAGCG -69
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