Mir-2-P3

MirGeneDB ID

Aae-Mir-2-P3

Family name

MIR-2 (all species)

Seed

AUCACAG

Species

Yellow fever mosquito (Aedes aegypti)

MiRBase ID

aae-mir-2a

Paralogues

Aae-Mir-2-P1-v1 Aae-Mir-2-P1-v2 Aae-Mir-2-P2b Aae-Mir-2-P4-v1 Aae-Mir-2-P4-v2 Aae-Mir-2-P5a Aae-Mir-2-P5b Aae-Mir-2-P7 Aae-Mir-2-P8

Orthologues

Aga-Mir-2-P3 Bge-Mir-2-P3-v1 Bge-Mir-2-P3-v2 Cbr-Mir-2-o3 Cel-Mir-2-o3 Csc-Mir-2-P3n Csc-Mir-2-P3o Dan-Mir-2-P3a-v1 Dan-Mir-2-P3a-v2 Dan-Mir-2-P3b Dlo-Mir-2-P3-v1 Dlo-Mir-2-P3-v2 Dma-Mir-2-P3 Dme-Mir-2-P3a Dme-Mir-2-P3b Dmo-Mir-2-P3b Dpu-Mir-2-P3 Dsi-Mir-2-P3a Dsi-Mir-2-P3b Dya-Mir-2-P3a Dya-Mir-2-P3b Gpa-Mir-2-P3a Gpa-Mir-2-P3b Gsp-Mir-2 Hme-Mir-2-P3-v1 Hme-Mir-2-P3-v2 Isc-Mir-2-P3 Lpo-Mir-2-P3g Lpo-Mir-2-P3h Lpo-Mir-2-P3i Lpo-Mir-2-P3k Lpo-Mir-2-P3l Lpo-Mir-2-P3m Ple-Mir-2 Tca-Mir-2-P3-v1 Tca-Mir-2-P3-v2

Node of Origin (locus)

Arthropoda

Node of Origin (family)

Protostomia

Genome context
(Aaeg_L3)

supercont1.268: 888595-888663 [-] Ensembl

Clustered miRNAs
(< 50kb from Mir-2-P3)

Mir-2-P4-v1 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P4-v2 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P3 supercont1.268: 888595-888663 [-] Ensembl
Mir-2-P2b supercont1.268: 888744-888807 [-] Ensembl
Mir-2-P1-v1 supercont1.268: 889091-889155 [-] Ensembl
Mir-2-P1-v2 supercont1.268: 889091-889155 [-] Ensembl
Mir-71 supercont1.268: 889383-889449 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

AACACCCGAUGAAAUAUGGGAACUGUUUCCACUCUCAAAGUGGUUGUGAAAUGAGUUACUCUUGAACGAUCUCAUAUCACAGCCAGCUUUGAAGAGCGAAACGGUUUCUCGCAGCUACGAGCAGGGAGU

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Structure

        10           20        30         40         50        60   
AACACCCGAUGAAAUAU---            CA   -      -|        A   AGUUACUCU 
                    GGGAACUGUUUC  CUC UCAAAG UGGUUGUGA AUG         \
                    UCUUUGGCAAAG  GAG AGUUUC ACCGACACU UAC         U
UGAGGGACGAGCAUCGACGC            C-   A      G^        A   UCUAGCAAG 
       120       110       100         90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Ge	Ge	So	So	To	To	To

Star sequence

Aae-Mir-2-P3_5p*

mirBase accession

MIMAT0014225

Sequence

0- ACUCUCAAAGUGGUUGUGAAAUG -23

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Mature sequence

Aae-Mir-2-P3_3p

mirBase accession

MIMAT0014226

Sequence

44- UAUCACAGCCAGCUUUGAAGAGCGA -69

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