MirGeneDB 2.1

MirGeneDB ID

Aae-Mir-2-P3

Family name MIR-2 (all species)
Seed AUCACAG
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-2a
Paralogues Aae-Mir-2-P1-v1  Aae-Mir-2-P1-v2  Aae-Mir-2-P2  Aae-Mir-2-P4-v1  Aae-Mir-2-P4-v2  Aae-Mir-2-P5a  Aae-Mir-2-P5b  Aae-Mir-2-P7  Aae-Mir-2-P8 
Orthologues Bge-Mir-2-P3  Cbr-Mir-2-o3  Cel-Mir-2-o3  Csc-Mir-2-P3n  Csc-Mir-2-P3o  Dan-Mir-2-P3a-v1  Dan-Mir-2-P3a-v2  Dan-Mir-2-P3b  Dma-Mir-2-P3  Dme-Mir-2-P3a  Dme-Mir-2-P3b  Dmo-Mir-2-P3b  Dpu-Mir-2-P3  Dsi-Mir-2-P3a  Dsi-Mir-2-P3b  Dya-Mir-2-P3a  Dya-Mir-2-P3b  Hme-Mir-2-P3-v1  Hme-Mir-2-P3-v2  Isc-Mir-2-P3  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Tca-Mir-2-P3-v1  Tca-Mir-2-P3-v2 
Node of Origin (locus) Arthropoda
Node of Origin (family) Protostomia
Genome context
(Aaeg_L3)
supercont1.268: 888597-888663 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P3)
Mir-2-P4-v1 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P4-v2 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P3 supercont1.268: 888597-888663 [-] Ensembl
Mir-2-P2 supercont1.268: 888744-888807 [-] Ensembl
Mir-2-P1-v1 supercont1.268: 889091-889155 [-] Ensembl
Mir-2-P1-v2 supercont1.268: 889091-889155 [-] Ensembl
Mir-71 supercont1.268: 889383-889449 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AACACCCGAUGAAAUAUGGGAACUGUUUCCACUCUCAAAGUGGUUGUGAAAUGAGUUACUCUUGAACGAUCUCAUAUCACAGCCAGCUUUGAAGAGCGAAACGGUUUCUCGCAGCUACGAGCAGGGA
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Structure
        10         20        30         40         50        60   
AACACCCGAUGAAAUAU-            CA   -      -|        A   AGUUACUCU 
                  GGGAACUGUUUC  CUC UCAAAG UGGUUGUGA AUG         \
                  UCUUUGGCAAAG  GAG AGUUUC ACCGACACU UAC         U
AGGGACGAGCAUCGACGC            C-   A      G^        A   UCUAGCAAG 
     120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
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Star sequence

Aae-Mir-2-P3_5p*

mirBase accessionMIMAT0014225
Sequence
0- ACUCUCAAAGUGGUUGUGAAAUG -23
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Mature sequence

Aae-Mir-2-P3_3p

mirBase accessionMIMAT0014226
Sequence
44- UAUCACAGCCAGCUUUGAAGAGC -67
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