MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-2-P3n

Family name MIR-2 (all species)
Seed AUCACAG
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-2-P1n  Csc-Mir-2-P1o  Csc-Mir-2-P2n  Csc-Mir-2-P2o  Csc-Mir-2-P3o  Csc-Mir-2-P4n  Csc-Mir-2-P4o 
Orthologues Aae-Mir-2-P3  Aga-Mir-2-P3  Bge-Mir-2-P3-v1  Bge-Mir-2-P3-v2  Cbr-Mir-2-o3  Cel-Mir-2-o3  Dlo-Mir-2-P3-v1  Dlo-Mir-2-P3-v2  Dma-Mir-2-P3  Dpu-Mir-2-P3  Gsp-Mir-2  Hme-Mir-2-P3-v1  Hme-Mir-2-P3-v2  Isc-Mir-2-P3  Ple-Mir-2  Tca-Mir-2-P3-v1  Tca-Mir-2-P3-v2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384303.1: 1024845-1024903 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUCUGACAGGAUUGUUUACUAGCCGUUCCGCUCACAAAGUGGCUGUUGUAUGUUGUUUUCUUCCAUAUCACAGCCAGCUUUGAUGAGUGAGAUGGGUAGCACAGCUGCGAAUCCAGGAC
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Structure
        10          20        30          40        50        
GUCUGACAGGAUUGUUUA--   G    UC      -     -|      U     UUGUU 
                    CUA CCGU  CGCUCA CAAAG UGGCUGU GUAUG     \
                    GAU GGUA  GUGAGU GUUUC ACCGACA UAUAC     U
CAGGACCUAAGCGUCGACAC   G    GA      A     G^      C     CUUCU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-2-P3n_5p*
mirBase accessionNone
Sequence 
0- CUCACAAAGUGGCUGUUGUAUG -22
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Mature sequence

Csc-Mir-2-P3n_3p
mirBase accessionNone
Sequence 
35- UAUCACAGCCAGCUUUGAUGAGUG -59
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