MirGeneDB 3.0
119 microRNA genes with node of origin C. sculpturatus
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Csc-Bantam-P16 None BANTAM GAGAUCA None None NW_019385956.1 96869 96929 - C. sculpturatus Protostomia No
Csc-Bantam-P17 None BANTAM GAGAUCA None None NW_019384376.1 788122 788182 - C. sculpturatus Protostomia No
Csc-Iab-4-P6 None IAB-4 CGUAUAC None None NW_019384315.1 245440 245497 + C. sculpturatus Arthropoda Unknown 1 1
Csc-Iab-4-P6-as None IAB-4 GGAUACA None None NW_019384315.1 245438 245496 - C. sculpturatus Arthropoda No 1
Csc-Iab-4-P7 None IAB-4 CGUAUAC None None NW_019384783.1 169684 169743 + C. sculpturatus Arthropoda Unknown
Csc-Iab-4-P7-as None IAB-4 GGAUACA None None NW_019384783.1 169682 169742 - C. sculpturatus Arthropoda No
Csc-Let-7-P18a None LET-7 GAGGUAG None None NW_019384344.1 388884 388951 + C. sculpturatus Bilateria No 1
Csc-Let-7-P18b None LET-7 GAGGUAG None None NW_019384344.1 386477 386544 + C. sculpturatus Bilateria No 1
Csc-Mir-1-P18a None MIR-1 GGAAUGU None None NW_019386523.1 39142 39203 + C. sculpturatus Bilateria Unknown 1
Csc-Mir-1-P18b None MIR-1 GGAAUGU None None NW_019385988.1 4423 4484 + C. sculpturatus Bilateria Unknown 1
Csc-Mir-1-P19 None MIR-1 GGAAUGU None None NW_019385263.1 290247 290306 - C. sculpturatus Bilateria No 1
Csc-Mir-2-P1n None MIR-2 AUCACAG None None NW_019384303.1 1024581 1024642 + C. sculpturatus Protostomia No 1
Csc-Mir-2-P1o None MIR-2 CAUCAAA None None NW_019384652.1 447944 448006 - C. sculpturatus Protostomia No 1 1 1
Csc-Mir-2-P2n None MIR-2 AUCACAG None None NW_019384303.1 1024715 1024775 + C. sculpturatus Protostomia No
Csc-Mir-2-P2o None MIR-2 AUCACAG None None NW_019384652.1 447782 447839 - C. sculpturatus Protostomia No
Csc-Mir-2-P3n None MIR-2 AUCACAG None None NW_019384303.1 1024845 1024903 + C. sculpturatus Protostomia No 1
Csc-Mir-2-P3o None MIR-2 AUCACAG None None NW_019384652.1 446579 446637 - C. sculpturatus Protostomia No 1 1
Csc-Mir-2-P4n None MIR-2 AUCACAG None None NW_019384303.1 1025167 1025228 + C. sculpturatus Protostomia No
Csc-Mir-2-P4o None MIR-2 AUCACAG None None NW_019384652.1 439498 439557 - C. sculpturatus Protostomia No
Csc-Mir-7-P14 None MIR-7 GGAAGAC None None NW_019384339.1 676564 676623 - C. sculpturatus Bilateria No 1
Csc-Mir-7-P15 None MIR-7 GGAAGAC None None NW_019384388.1 896519 896578 + C. sculpturatus Bilateria No 1
Csc-Mir-9-P26 None MIR-9 CUUUGGU None None NW_019385500.1 106196 106255 + C. sculpturatus Bilateria No 1 1
Csc-Mir-9-P27 None MIR-9 CUUUGGU None None NW_019385150.1 14178 14237 + C. sculpturatus Bilateria No 1 1 1
Csc-Mir-10-P1q1-v1 None MIR-10 ACCCUGU None None NW_019384341.1 354569 354629 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P1q1-v2 None MIR-10 CCCUGUA None None NW_019384341.1 354570 354628 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P1q2-v1 None MIR-10 ACCCUGU None None NW_019384341.1 345312 345372 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P1q2-v2 None MIR-10 CCCUGUA None None NW_019384341.1 345313 345371 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P1q3-v1 None MIR-10 ACCCUGU None None NW_019384341.1 336261 336321 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P1q3-v2 None MIR-10 CCCUGUA None None NW_019384341.1 336262 336320 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P1r None MIR-10 ACCCUGU None None NW_019384862.1 289995 290055 + C. sculpturatus Eumetazoa No
Csc-Mir-10-P2r1 None MIR-10 ACCCGUA None None NW_019384344.1 388111 388173 + C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P2r2 None MIR-10 ACCCGUA None None NW_019384344.1 385704 385766 + C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P3r1 None MIR-10 CCCUGAG None None NW_019384344.1 397903 397958 + C. sculpturatus Eumetazoa No
Csc-Mir-10-P3r2 None MIR-10 CCCUGAG None None NW_019384344.1 391437 391492 + C. sculpturatus Eumetazoa No
Csc-Mir-10-P4q None MIR-10 AAGCUCG None None NW_019392310.1 714 771 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P4r None MIR-10 AAGCUCG None None NW_019384862.1 329293 329354 - C. sculpturatus Eumetazoa No
Csc-Mir-34-P19a None MIR-34 GGCAGUG None None NW_019384483.1 607027 607084 - C. sculpturatus Bilateria No 1
Csc-Mir-34-P19b None MIR-34 GGCAGUG None None NW_019384483.1 599502 599559 - C. sculpturatus Bilateria No 1
Csc-Mir-34-P19c None MIR-34 GGCAGUG None None NW_019384483.1 589710 589767 - C. sculpturatus Bilateria No 1
Csc-Mir-34-P20 None MIR-34 GGCAGUG None None NW_019384537.1 174434 174492 - C. sculpturatus Bilateria No 1
Csc-Mir-67-P12 None MIR-67 CUCACUC None None NW_019384922.1 142101 142161 + C. sculpturatus Protostomia No
Csc-Mir-67-P13 None MIR-67 CACAACC None None NW_019384666.1 682071 682130 + C. sculpturatus Protostomia No 1
Csc-Mir-71-P14 None MIR-71 CUCACUA None None NW_019384303.1 1024444 1024501 + C. sculpturatus Nephrozoa No 1
Csc-Mir-71-P15 None MIR-71 CUCACUA None None NW_019384652.1 448162 448221 - C. sculpturatus Nephrozoa No 1 1
Csc-Mir-76-P10a None MIR-76 UCGUUGU None None NW_019384798.1 716969 717032 + C. sculpturatus Nephrozoa No
Csc-Mir-76-P10b None MIR-76 UCGUUGU None None NW_019384798.1 723442 723505 + C. sculpturatus Nephrozoa No
Csc-Mir-87-P1k1 None MIR-87 UGCCUGG None None NW_019384773.1 172192 172253 - C. sculpturatus Protostomia No 1
Csc-Mir-87-P1k2 None MIR-87 UGCCUGG None None NW_019384655.1 735508 735569 - C. sculpturatus Protostomia No
Csc-Mir-87-P1l None MIR-87 AGCCCGG None None NW_019384506.1 706723 706782 + C. sculpturatus Protostomia No 1 1
Csc-Mir-87-P2k None MIR-87 UGAGCAA None None NW_019384773.1 171965 172023 - C. sculpturatus Protostomia No
Csc-Mir-87-P2l None MIR-87 UGAGCAA None None NW_019384506.1 706960 707019 + C. sculpturatus Protostomia No 1
Csc-Mir-92-P12 None MIR-92 AUUGCAC None None NW_019385059.1 330696 330755 - C. sculpturatus Bilateria No
Csc-Mir-92-P13 None MIR-92 AUUGCAC None None NW_019384629.1 792402 792459 - C. sculpturatus Bilateria No 1 1
Csc-Mir-96-P1w None MIR-96 UUGGCAC None None NW_019385290.1 225058 225118 + C. sculpturatus Bilateria No 1
Csc-Mir-96-P1x None MIR-96 UUGGCAC None None NW_019385963.1 35587 35647 - C. sculpturatus Bilateria No 1
Csc-Mir-96-P2w None MIR-96 UUGGCAC None None NW_019385290.1 224908 224968 + C. sculpturatus Bilateria Unknown 1 1
Csc-Mir-96-P3w None MIR-96 AUGGCAC None None NW_019385290.1 223516 223575 + C. sculpturatus Bilateria No 1
Csc-Mir-96-P3x None MIR-96 AUGGCAC None None NW_019385963.1 35887 35949 - C. sculpturatus Bilateria No 1
Csc-Mir-124-P25 None MIR-124 AAGGCAC None None NW_019385373.1 235027 235085 + C. sculpturatus Bilateria No 1
Csc-Mir-124-P26 None MIR-124 AAGGCAC None None NW_019384590.1 630100 630158 - C. sculpturatus Bilateria No 1
Csc-Mir-133-P18 None MIR-133 UGGUCCC None None NW_019385988.1 43287 43351 + C. sculpturatus Bilateria No 1 1
Csc-Mir-133-P19a None MIR-133 UGGUCCC None None NW_019385263.1 285278 285338 + C. sculpturatus Bilateria Unknown
Csc-Mir-133-P19b None MIR-133 UGGUCCC None None NW_019385263.1 288000 288060 + C. sculpturatus Bilateria Unknown
Csc-Mir-137-P21 None MIR-137 UAUUGCU None None NW_019385098.1 157758 157816 + C. sculpturatus Bilateria No 1
Csc-Mir-137-P22 None MIR-137 UAUUGCU None None NW_019385410.1 42970 43029 - C. sculpturatus Bilateria No 1
Csc-Mir-153-P18 None MIR-153 CAUUUUU None None NW_019384443.1 386667 386726 + C. sculpturatus Bilateria No 1
Csc-Mir-153-P19a-v1 None MIR-153 CAUUUUU None None NW_019385909.1 125023 125080 + C. sculpturatus Bilateria No
Csc-Mir-153-P19a-v2 None MIR-153 UCAUUUU None None NW_019385909.1 125022 125081 + C. sculpturatus Bilateria No
Csc-Mir-153-P19b-v1 None MIR-153 CAUUUUU None None NW_019385909.1 125554 125611 + C. sculpturatus Bilateria No 1
Csc-Mir-153-P19b-v2 None MIR-153 UCAUUUU None None NW_019385909.1 125553 125612 + C. sculpturatus Bilateria No 1
Csc-Mir-184-P24 None MIR-184 GGACGGA None None NW_019386303.1 29100 29157 + C. sculpturatus Nephrozoa No 1
Csc-Mir-184-P25 None MIR-184 GGACGGA None None NW_019385135.1 369988 370045 - C. sculpturatus Nephrozoa No 1
Csc-Mir-190-P17 None MIR-190 GAUAUGU None None NW_019384895.1 258792 258850 + C. sculpturatus Bilateria Unknown 1
Csc-Mir-190-P18 None MIR-190 GAUAUGU None None NW_019384336.1 223558 223616 - C. sculpturatus Bilateria No 1
Csc-Mir-193-P1u None MIR-193 ACUGGCC None None NW_019384618.1 321572 321628 - C. sculpturatus Bilateria No 1
Csc-Mir-193-P2v None MIR-193 AAUGCCC None None NW_019387724.1 416 476 + C. sculpturatus Bilateria No 1
Csc-Mir-210-P13a None MIR-210 UGUGCGU None None NW_019384588.1 118812 118876 - C. sculpturatus Bilateria No 1 1
Csc-Mir-210-P13b None MIR-210 UGUGCGU None None NW_019384588.1 110384 110448 - C. sculpturatus Bilateria No 1 1
Csc-Mir-210-P14 None MIR-210 UGUGCGU None None NW_019385932.1 51022 51079 - C. sculpturatus Bilateria Yes 1 1
Csc-Mir-252-P1k None MIR-252 UAAGUAG None None NW_019384632.1 328041 328098 + C. sculpturatus Bilateria No 1 1
Csc-Mir-252-P1l None MIR-252 UAAGUAG None None NW_019387483.1 7658 7716 + C. sculpturatus Bilateria No
Csc-Mir-252-P2k None MIR-252 UAAGUAC None None NW_019384632.1 332578 332635 + C. sculpturatus Bilateria Unknown
Csc-Mir-252-P2l-v1 None MIR-252 UAAGUAC None None NW_019384413.1 883437 883499 + C. sculpturatus Bilateria Unknown 1 1
Csc-Mir-252-P2l-v2 None MIR-252 AAGUACU None None NW_019384413.1 883438 883498 + C. sculpturatus Bilateria Unknown 1
Csc-Mir-276-P10 None MIR-276 AGGAACU None None NW_019384353.1 622467 622524 + C. sculpturatus Arthropoda No 1
Csc-Mir-276-P11a None MIR-276 AGGAACU None None NW_019385219.1 166756 166813 + C. sculpturatus Arthropoda No 1 1
Csc-Mir-276-P11b None MIR-276 AGGAACU None None NW_019385219.1 174054 174111 + C. sculpturatus Arthropoda No 1 1
Csc-Mir-277-P18a None MIR-277 AAAUGCA None None NW_019384483.1 601078 601139 - C. sculpturatus Protostomia No 1
Csc-Mir-277-P18b None MIR-277 AAAUGCA None None NW_019384483.1 591286 591347 - C. sculpturatus Protostomia No 1
Csc-Mir-279-P9a None MIR-279 GACUAGA None None NW_019384435.1 45082 45138 - C. sculpturatus Protostomia No 1
Csc-Mir-279-P9b None MIR-279 GACUAGA None None NW_019384435.1 37483 37539 - C. sculpturatus Protostomia No 1
Csc-Mir-317-P17 None MIR-317 GAGUACC None None NW_019384537.1 174576 174635 - C. sculpturatus Protostomia No 1 1
Csc-Mir-317-P18 None MIR-317 GAGUACC None None NW_019384483.1 602611 602681 - C. sculpturatus Protostomia No 1 1
Csc-Mir-375-P11 None MIR-375 UUGUUCG None None NW_019385795.1 112088 112158 + C. sculpturatus Nephrozoa No 1
Csc-Mir-375-P12 None MIR-375 UUGUUCG None None NW_019386010.1 52930 52989 - C. sculpturatus Nephrozoa No 1
Csc-Mir-750-P7 None MIR-750 CAGAUCU None None NW_019384491.1 453800 453866 + C. sculpturatus Protostomia No 1
Csc-Mir-750-P8 None MIR-750 CAGAUCU None None NW_019384583.1 523594 523660 - C. sculpturatus Protostomia Unknown 1
Csc-Mir-3931-P8a None MIR-3931 ACUUUGA None None NW_019384305.1 1207374 1207432 - C. sculpturatus Chelicerata Unknown 1
Csc-Mir-3931-P8b None MIR-3931 ACUUUGA None None NW_019384305.1 1189312 1189370 - C. sculpturatus Chelicerata Unknown 1
Csc-Mir-5305-P9a None MIR-5305 UGGGCUU None None NW_019384740.1 265526 265585 + C. sculpturatus Chelicerata No
Csc-Mir-5305-P9b None MIR-5305 UGGGCUU None None NW_019384740.1 267777 267836 + C. sculpturatus Chelicerata Unknown
Csc-Mir-5305-P10 None MIR-5305 UGGGCUU None None NW_019384372.1 165279 165338 + C. sculpturatus Chelicerata Unknown
Csc-Novel-1 None CSC-NOVEL-1 UACCAAA None None NW_019384475.1 289440 289501 - C. sculpturatus C. sculpturatus No
Csc-Novel-2-P1a None CSC-NOVEL-2 CAAUUCA None None NW_019387203.1 10097 10155 + C. sculpturatus C. sculpturatus No 1
Csc-Novel-2-P1b None CSC-NOVEL-2 CAAUUCA None None NW_019384564.1 282774 282832 - C. sculpturatus C. sculpturatus No 1
Csc-Novel-3 None CSC-NOVEL-3 UUGCCUA None None NW_019392609.1 58956 59011 - C. sculpturatus C. sculpturatus No
Csc-Novel-4-P1a None CSC-NOVEL-4 CAUGUUG None None NW_019385009.1 259864 259921 + C. sculpturatus C. sculpturatus No
Csc-Novel-4-P1b None CSC-NOVEL-4 CAUGUUG None None NW_019385009.1 274304 274361 + C. sculpturatus C. sculpturatus No
Csc-Novel-4-P1c None CSC-NOVEL-4 CAUGUUG None None NW_019385009.1 283970 284027 + C. sculpturatus C. sculpturatus No
Csc-Novel-5-P1a None CSC-NOVEL-5 UCGUCUA None None NW_019384667.1 172176 172245 + C. sculpturatus C. sculpturatus No 1
Csc-Novel-5-P1b None CSC-NOVEL-5 UCGUCUA None None NW_019384667.1 189401 189470 + C. sculpturatus C. sculpturatus No 1
Csc-Novel-6-v1 None CSC-NOVEL-6 UGAGUGU None None NW_019384719.1 292442 292502 + C. sculpturatus C. sculpturatus No 1 1
Csc-Novel-6-v2 None CSC-NOVEL-6 UCAGUUG None None NW_019384719.1 292443 292501 + C. sculpturatus C. sculpturatus No
Csc-Novel-7 None CSC-NOVEL-7 UCAUUUU None None NW_019384314.1 853076 853138 - C. sculpturatus C. sculpturatus No
Csc-Novel-8 None CSC-NOVEL-8 AUUCUUG None None NW_019384368.1 400662 400722 - C. sculpturatus C. sculpturatus No
Csc-Novel-9 None CSC-NOVEL-9 GGCUCAG None None NW_019384497.1 15326 15383 + C. sculpturatus C. sculpturatus No
Csc-Novel-10 None CSC-NOVEL-10 GCAAGGG None None NW_019384765.1 559592 559657 + C. sculpturatus C. sculpturatus No 1
Csc-Novel-11 None CSC-NOVEL-11 GAAGAUC None None NW_019385296.1 79306 79363 - C. sculpturatus C. sculpturatus No
Csc-Novel-12 None CSC-NOVEL-12 ACAUGCA None None NW_019386019.1 106850 106907 - C. sculpturatus C. sculpturatus No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all