MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-2-P1o

Family name MIR-2 (all species)
Seed CAUCAAA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-2-P1n  Csc-Mir-2-P2n  Csc-Mir-2-P2o  Csc-Mir-2-P3n  Csc-Mir-2-P3o  Csc-Mir-2-P4n  Csc-Mir-2-P4o 
Orthologues Aae-Mir-2-P1-v1  Aae-Mir-2-P1-v2  Aga-Mir-2-P1-v1  Aga-Mir-2-P1-v2  Bge-Mir-2-P1-v1  Bge-Mir-2-P1-v2  Dan-Mir-2-P1-v1  Dan-Mir-2-P1-v2  Dlo-Mir-2-P1-v1  Dlo-Mir-2-P1-v2  Dma-Mir-2-P1  Dme-Mir-2-P1-v1  Dme-Mir-2-P1-v2  Dmo-Mir-2-P1  Dpu-Mir-2-P1  Dsi-Mir-2-P1-v1  Dsi-Mir-2-P1-v2  Dya-Mir-2-P1-v1  Dya-Mir-2-P1-v2  Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gsp-Mir-2  Hme-Mir-2-P1-v1  Hme-Mir-2-P1-v2  Isc-Mir-2-P1  Ple-Mir-2  Tca-Mir-2-P1-v1  Tca-Mir-2-P1-v2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384652.1: 447944-448006 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGAAUUUUAUUUCAUGGGUCUGGUAUAGCCAUCAAAGAGACUGUGAAAUGUGUAAUUUUAAAAGAACAUAUCACAGCCACCUUUGAUGAGCUGGACAAGAUCUUAUUUCUACAAUUACAAA
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Structure
        10         20        30         40         50        60
UUUGAAUUUUAUUUCAU-      G  A    -        AGA-|     A   UGUAAUU 
                  GGGUCU GU UAGC CAUCAAAG    CUGUGA AUG       U
                  UCUAGA CA GUCG GUAGUUUC    GACACU UAC       U
AAACAUUAACAUCUUUAU      A  G    A        CACC^     A   AAGAAAA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-2-P1o_5p
mirBase accessionNone
Sequence 
0- CCAUCAAAGAGACUGUGAAAUG -22
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Star sequence

Csc-Mir-2-P1o_3p*
mirBase accessionNone
Sequence 
40- UAUCACAGCCACCUUUGAUGAGC -63
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