MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-2-P1-v1

Family name MIR-2 (all species)
Seed CACAGCC
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-2c
Paralogues Dme-Mir-2-P1-v2  Dme-Mir-2-P2a  Dme-Mir-2-P2b1  Dme-Mir-2-P2b2  Dme-Mir-2-P3a  Dme-Mir-2-P3b  Dme-Mir-2-P4a-v1  Dme-Mir-2-P4a-v2  Dme-Mir-2-P4b-v1  Dme-Mir-2-P4b-v2  Dme-Mir-2-P5  Dme-Mir-2-P6a  Dme-Mir-2-P6b  Dme-Mir-2-P6c  Dme-Mir-2-P7  Dme-Mir-2-P8-v1  Dme-Mir-2-P8-v2  Dme-Mir-2-P9-v1  Dme-Mir-2-P9-v2 
Orthologues Aae-Mir-2-P1-v1  Aae-Mir-2-P1-v2  Aga-Mir-2-P1-v1  Aga-Mir-2-P1-v2  Bge-Mir-2-P1-v1  Bge-Mir-2-P1-v2  Csc-Mir-2-P1n  Csc-Mir-2-P1o  Dan-Mir-2-P1-v1  Dan-Mir-2-P1-v2  Dlo-Mir-2-P1-v1  Dlo-Mir-2-P1-v2  Dma-Mir-2-P1  Dmo-Mir-2-P1  Dpu-Mir-2-P1  Dsi-Mir-2-P1-v1  Dsi-Mir-2-P1-v2  Dya-Mir-2-P1-v1  Dya-Mir-2-P1-v2  Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gsp-Mir-2  Hme-Mir-2-P1-v1  Hme-Mir-2-P1-v2  Isc-Mir-2-P1  Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Ple-Mir-2  Tca-Mir-2-P1-v1  Tca-Mir-2-P1-v2 
Node of Origin (locus) Arthropoda
Node of Origin (family) Protostomia
Genome context
(Drosophila_melanogaster_BDGP6)		 3R: 15417760-15417826 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P1-v1)		 Mir-2-P2b1 3R: 15417411-15417470 [-] UCSC Ensembl
Mir-2-P2a 3R: 15417547-15417609 [-] UCSC Ensembl
Mir-2-P1-v1 3R: 15417760-15417826 [-] UCSC Ensembl
Mir-2-P1-v2 3R: 15417760-15417826 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGACGUUACCUCGUAUCUUACUUUCAAUGUCAUCAAAAAGGGCUGAAGAAAGAUAUUUCUGCAUUUGAAUCGUAUCACAGCCAGCUUUGAUGGGCAUUGCAAUGAGCAGCGAUAGCAAAAUGUGAC
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Structure
        10           20        30         40        50        60  
UCGACGUUACCUCGUAU---|   C  U       -      AAG     AAGAAAGAUAUUUCU 
                    CUUA UU CAAUGUC AUCAAA   GGCUG               G
                    GAGU AA GUUACGG UAGUUU   CCGAC               C
CAGUGUAAAACGAUAGCGAC^   -  C       G      CGA     ACUAUGCUAAGUUUA 
     120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-2-P1-v1_5p*
mirBase accessionMIMAT0020845
Sequence 
0- UCAUCAAAAAGGGCUGAAGAAA -22
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Mature sequence

Dme-Mir-2-P1-v1_3p
mirBase accessionMIMAT0000411
Sequence 
45- UCACAGCCAGCUUUGAUGGGCA -67
Get sequence
Proposed targets microrna.org: MIMAT0000411
TargetScanFly: dme-miR-2c