MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-2-P1

Family name MIR-2 (all species)
Seed AUCACAG
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues Dma-Mir-2-o2  Dma-Mir-2-P2  Dma-Mir-2-P3  Dma-Mir-2-P4  Dma-Mir-2-P5 
Orthologues Aae-Mir-2-P1-v1  Aae-Mir-2-P1-v2  Aga-Mir-2-P1-v1  Aga-Mir-2-P1-v2  Bge-Mir-2-P1-v1  Bge-Mir-2-P1-v2  Csc-Mir-2-P1n  Csc-Mir-2-P1o  Dan-Mir-2-P1-v1  Dan-Mir-2-P1-v2  Dlo-Mir-2-P1-v1  Dlo-Mir-2-P1-v2  Dme-Mir-2-P1-v1  Dme-Mir-2-P1-v2  Dmo-Mir-2-P1  Dpu-Mir-2-P1  Dsi-Mir-2-P1-v1  Dsi-Mir-2-P1-v2  Dya-Mir-2-P1-v1  Dya-Mir-2-P1-v2  Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gsp-Mir-2  Hme-Mir-2-P1-v1  Hme-Mir-2-P1-v2  Isc-Mir-2-P1  Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Ple-Mir-2  Tca-Mir-2-P1-v1  Tca-Mir-2-P1-v2 
Node of Origin (locus) Arthropoda
Node of Origin (family) Protostomia
Genome context
(DMA_ASM399081)		 NC_046175.1: 11973585-11973670 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGUUACGCGUAGAAAAACUUAUUUCGGGCCGUCAAAGUCGACUGGGAAAUGCUGUAGAAAGAAUUCUCGCUAAUCCCGGAAUUUCAAAGACAUAUCACAGCCAGCUUUGACGAGCCGGAAAUCGAGUCUUAUUCACCCAUUCUCA
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Structure
        10         20         30         40        50        60        70  
UCGUUACGCGUAGAAAA-    -     G   -|        CGA   G  A   CUGUAGAAAGAAUUCUCGC 
                  ACUU AUUUC GGC CGUCAAAGU   CUG GA AUG                   \
                  UGAG UAAAG CCG GCAGUUUCG   GAC CU UAC                   U
ACUCUUACCCACUUAUUC    C     G   A^        ACC   A  A   AGAAACUUUAAGGCCCUAA 
    140       130       120       110       100        90        80
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Star sequence

Dma-Mir-2-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGUCAAAGUCGACUGGGAAAUG -22
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Mature sequence

Dma-Mir-2-P1_3p
mirBase accessionNone
Sequence 
63- UAUCACAGCCAGCUUUGACGAGC -86
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