MirGeneDB 3.0
81 Daphnia magna microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC 01 02 03 04 05 06 07 08 09 10 11 12 13 14
Dma-Bantam None BANTAM GAGAUCA None None NC_046176.1 6757482 6757544 - Protostomia Protostomia No
Dma-Iab-4 None IAB-4 CGUAUAC None None NC_046178.1 8042710 8042767 - Arthropoda Arthropoda Unknown 1
Dma-Let-7 None LET-7 GAGGUAG None None NW_022656250.1 895 1062 - Bilateria Bilateria No 1
Dma-Mir-1 None MIR-1 GGAAUGU None None NC_046176.1 5279564 5279624 - Bilateria Bilateria No 1
Dma-Mir-2-o2 None MIR-2 GAUAAUU None None NC_046178.1 1060033 1060091 - Daphnia Protostomia No 1
Dma-Mir-2-P1 None MIR-2 AUCACAG None None NC_046175.1 11973585 11973670 + Arthropoda Protostomia No
Dma-Mir-2-P2 None MIR-2 AUCACAG None None NC_046175.1 11973770 11973832 + Pancrustacea Protostomia No
Dma-Mir-2-P3 None MIR-2 AUCACAG None None NC_046175.1 11973888 11973956 + Arthropoda Protostomia No
Dma-Mir-2-P4 None MIR-2 UUGUCAG None None NC_046175.1 11974083 11974146 + Arthropoda Protostomia No 1 1
Dma-Mir-2-P5 None MIR-2 AUCACAG None None NC_046175.1 6286723 6286816 - Pancrustacea Protostomia No
Dma-Mir-3 None MIR-3 CACUGGG None None NC_046174.1 2509456 2509516 + Pancrustacea Pancrustacea No 1
Dma-Mir-7 None MIR-7 GGAAGAC None None LRGB01002190.1 1222125 1222188 + Bilateria Bilateria No 1
Dma-Mir-8 None MIR-8 AAUACUG None None NC_046181.1 5200844 5200917 - Nephrozoa Nephrozoa No 1 1
Dma-Mir-9-P9 None MIR-9 CUUUGGU None None NC_046175.1 6286883 6286941 - Pancrustacea Bilateria No 1
Dma-Mir-9-P10 None MIR-9 CUUUGGU None None NC_046179.1 9004931 9004991 - Pancrustacea Bilateria No 1 1 1
Dma-Mir-10-P1-v1 None MIR-10 CCCUGUA None None NC_046178.1 8231923 8231981 + Bilateria Eumetazoa No 1
Dma-Mir-10-P1-v2 None MIR-10 ACCCUGU None None NC_046178.1 8231922 8231982 + Bilateria Eumetazoa No 1
Dma-Mir-10-P2 None MIR-10 ACCCGUA None None NW_022656250.1 1195 1271 - Bilateria Eumetazoa No 1
Dma-Mir-10-P3 None MIR-10 CCCUGAG None None NC_046176.1 1107561 1107623 - Bilateria Eumetazoa No 1 1
Dma-Mir-10-P4 None MIR-10 UACCCUG None None LRGB01000810.1 3483 3547 + Protostomia Eumetazoa No
Dma-Mir-12 None MIR-12 GAGUAUU None None NC_046176.1 6126792 6126852 + Protostomia Protostomia No 1 1
Dma-Mir-22-P2 None MIR-22 GGUCCUU None None NC_046182.1 3088010 3088075 + Bilateria Bilateria No 1
Dma-Mir-29-P1 None MIR-29 AGCACCA None None NC_046176.1 6642439 6642506 - Bilateria Bilateria No
Dma-Mir-29-P2 None MIR-29 CUGAGUC None None NC_046175.1 6286592 6286666 - Bilateria Bilateria No
Dma-Mir-31 None MIR-31 GGCAAGA None None NC_046175.1 12368730 12368791 - Bilateria Bilateria No
Dma-Mir-33 None MIR-33 AAUGCUU None None NC_046176.1 364079 364144 + Bilateria Bilateria No 1
Dma-Mir-34 None MIR-34 GGCAGUG None None NC_046180.1 8462568 8462635 + Bilateria Bilateria No
Dma-Mir-36 None MIR-36 CACCGGG None None NC_046175.1 6285796 6285856 - Protostomia Protostomia No 1
Dma-Mir-67 None MIR-67 CUCGUUC None None NC_046175.1 1203701 1203791 + Protostomia Protostomia No 1
Dma-Mir-71 None MIR-71 GAAAGAC None None NC_046175.1 11973451 11973516 + Nephrozoa Nephrozoa No
Dma-Mir-76 None MIR-76 UCGUUGU None None NC_046179.1 9483697 9483755 + Nephrozoa Nephrozoa No 1
Dma-Mir-87-o5a None MIR-87 UGAGCAA None None NC_046176.1 6157349 6157434 - Daphnia Protostomia No 1
Dma-Mir-87-o5b None MIR-87 UGAGCAA None None NC_046176.1 6157168 6157231 - Daphnia Protostomia No 1
Dma-Mir-92-P3 None MIR-92 AUUGCAC None None NC_046181.1 7370656 7370733 - Pancrustacea Bilateria No 1
Dma-Mir-92-P4 None MIR-92 AUUGCAC None None NC_046181.1 7370498 7370557 - Pancrustacea Bilateria No
Dma-Mir-96-P2-v1 None MIR-96 UUGGCAC None None NC_046180.1 10114057 10114119 - Bilateria Bilateria No 1
Dma-Mir-96-P2-v2 None MIR-96 UGGCACU None None NC_046180.1 10114058 10114118 - Bilateria Bilateria No 1
Dma-Mir-96-P3 None MIR-96 AUGGCAC None None NC_046180.1 10114339 10114567 - Bilateria Bilateria No 1 1
Dma-Mir-124 None MIR-124 GUGUUCA None None NC_046174.1 10808865 10808927 + Bilateria Bilateria No 1
Dma-Mir-133 None MIR-133 UGGUCCC None None NC_046176.1 5268647 5268711 - Bilateria Bilateria No 1 1
Dma-Mir-137 None MIR-137 UAUUGCU None None NC_046175.1 2231788 2231849 - Bilateria Bilateria No 1
Dma-Mir-153 None MIR-153 UGCAUAG None None NC_046175.1 7410422 7410486 + Bilateria Bilateria No
Dma-Mir-184 None MIR-184 GGACGGA None None NC_046174.1 2565658 2565755 + Nephrozoa Nephrozoa No 1
Dma-Mir-190 None MIR-190 GAUAUGU None None NC_046175.1 13045650 13045714 + Bilateria Bilateria No 1
Dma-Mir-193-P1 None MIR-193 GGGAUUU None None NC_046179.1 6292295 6292353 + Bilateria Bilateria No
Dma-Mir-210 None MIR-210 GCUGCUG None None NC_046183.1 6424782 6424857 + Bilateria Bilateria No 1
Dma-Mir-216-P1 None MIR-216 AAUAUCA None None NC_046176.1 6125840 6125925 + Nephrozoa Nephrozoa No 1
Dma-Mir-216-P2 None MIR-216 AAUCUCA None None NC_046176.1 6126328 6126441 + Nephrozoa Nephrozoa Yes 1
Dma-Mir-219 None MIR-219 GAAAUGU None None NC_046182.1 5147273 5147333 - Bilateria Bilateria No 1 1
Dma-Mir-252-P1 None MIR-252 UAAGUAG None None NC_046174.1 12626051 12626115 - Bilateria Bilateria No 1 1
Dma-Mir-252-P2-v1 None MIR-252 UAAGUAC None None NC_046174.1 8936495 8936562 - Bilateria Bilateria No 1
Dma-Mir-252-P2-v2 None MIR-252 AAGUACU None None NC_046174.1 8936496 8936561 - Bilateria Bilateria No
Dma-Mir-275 None MIR-275 CAGGUAC None None NC_046180.1 7554925 7554989 - Arthropoda Arthropoda No 1 1
Dma-Mir-276 None MIR-276 AGGAACU None None NC_046181.1 1531012 1531082 - Arthropoda Arthropoda No 1 1
Dma-Mir-277 None MIR-277 AAAUGCA None None NC_046180.1 8461501 8461567 + Protostomia Protostomia No 1
Dma-Mir-278 None MIR-278 CGGUGGG None None NC_046181.1 8681550 8681703 + Bilateria Bilateria No 1
Dma-Mir-279-o8 None MIR-279 GUGAGCG None None NC_046179.1 204663 204723 - Daphnia Protostomia No 1 1
Dma-Mir-279-o9 None MIR-279 GACUAGA None None NC_046182.1 2914774 2914845 + Daphnia Protostomia No
Dma-Mir-279-P1c None MIR-279 GACUAGA None None NC_046175.1 6287015 6287090 - Daphnia Protostomia No 1 1
Dma-Mir-279-P1d None MIR-279 GACUAGA None None NC_046175.1 6285937 6286000 - Daphnia Protostomia No 1
Dma-Mir-279-P2 None MIR-279 GACUAGA None None NC_046174.1 9091292 9091368 + Pancrustacea Protostomia No 1
Dma-Mir-279-P3 None MIR-279 GUGGGUC None None NC_046174.1 9091763 9091828 + Pancrustacea Protostomia No 1 1
Dma-Mir-281 None MIR-281 AGAGAGC None None NC_046174.1 7564928 7564995 + Nephrozoa Nephrozoa No 1
Dma-Mir-282-v1 None MIR-282 CAACGUC None None NC_046178.1 847714 847800 - Pancrustacea Pancrustacea No 1 1
Dma-Mir-282-v2 None MIR-282 AACGUCU None None NC_046178.1 847714 847800 - Pancrustacea Pancrustacea No 1
Dma-Mir-305 None MIR-305 UUGUACU None None NC_046180.1 7554472 7554559 - Cryptovermes Cryptovermes No
Dma-Mir-315 None MIR-315 UUUGAUU None None NC_046182.1 7284560 7284654 - Nephrozoa Nephrozoa No 1 1
Dma-Mir-317 None MIR-317 GAACACA None None NC_046180.1 8460499 8460565 + Protostomia Protostomia No
Dma-Mir-375 None MIR-375 UUGUUCG None None NC_046175.1 1628518 1628758 - Nephrozoa Nephrozoa No 1
Dma-Mir-750 None MIR-750 CAGAUCU None None NC_046176.1 1467288 1467439 + Protostomia Protostomia No 1
Dma-Mir-965 None MIR-965 AAGCGUA None None NC_046175.1 6247768 6247831 - Pancrustacea Pancrustacea No 1
Dma-Mir-1175 None MIR-1175 GAGAUUC None None NC_046176.1 1467560 1467625 + Protostomia Protostomia No 1
Dma-Mir-1993 None MIR-1993 CGUGAAU None None NC_046179.1 2555927 2555987 + Protostomia Protostomia No 1
Dma-Mir-12603 None MIR-12603 GUGAUGU None None NC_046182.1 5639526 5639593 - Daphnia Daphnia No 1 1
Dma-Mir-12604 None MIR-12604 CUGGGUU None None NC_046174.1 2509619 2509677 + Daphnia Daphnia No 1
Dma-Mir-12605 None MIR-12605 UGCACUG None None NC_046183.1 5280622 5280684 + Branchiopoda Branchiopoda No
Dma-Mir-12606 None MIR-12606 CUUGGUU None None NC_046174.1 2509231 2509290 + Daphnia Daphnia No 1 1
Dma-Mir-12607-v1 None MIR-12607 ACUGGGU None None NC_046174.1 2509081 2509143 + Daphnia Daphnia No
Dma-Mir-12607-v2 None MIR-12607 CUGGGUA None None NC_046174.1 2509081 2509143 + Daphnia Daphnia No
Dma-Mir-12608 None MIR-12608 GGGGGAA None None NC_046175.1 6286446 6286507 - Daphnia Daphnia No
Dma-Novel-1 None DMA-NOVEL-1 CCUGUUU None None None None None None D. magna D. magna No

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