MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-22-P2

Family name MIR-22 (all species)
Seed GGUCCUU
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(DMA_ASM399081)		 NC_046182.1: 3088010-3088075 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGCCUAUUUAGUUUGUCCCUGUAUUGGGUCGGUCCUUCCCGGGGCACCUUGCCGUUAGGUAGUUGAGCAAGCGAGCUGCCCAGUGAAGGGCUUUCCGAAUCAGGAGAAUGACCACCGUUUCGUUU
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Structure
        10           20        30        40        50        60  
UUGCCUAUUUAGUUUGUC---|   U   G  UC        CCG     C     CGUUAGGU 
                     CCUG AUU GG  GGUCCUUC   GGGCA CUUGC        A
                     GGAC UAA CC  UCGGGAAG   CCCGU GAGCG        G
UUUGCUUUGCCACCAGUAAGA^   -   G  UU        UGA     C     AACGAGUU 
    120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Mature sequence

Dma-Mir-22-P2_5p
mirBase accessionNone
Sequence 
0- CGGUCCUUCCCGGGGCACCUUGC -23
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Star sequence

Dma-Mir-22-P2_3p*
mirBase accessionNone
Sequence 
43- GAGCUGCCCAGUGAAGGGCUUUC -66
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