MirGeneDB 3.0

MirGeneDB ID

Eba-Mir-22-P2

Family name MIR-22 (all species)
Seed AGCUGCC
Species Epimenia (Solenogaster) (Epimenia babai)
MiRBase ID
Paralogues Eba-Mir-22-P1 
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Hru-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_011762755.2_ASM1176275v2_Epimenia)
WURV02168762.1: 13875-13934 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGUAGCCUUACUUAUCUACUGCGGUAUGGCCACCCUUCGUCUGUCCAACUGUCUGGUAUUCGAGUUGAUAGCUGCCAGAUGAAGGGCUGUCAUGGGCGGAACGUGCUACGAAUAAUCGAA
Get precursor sequence
Structure
        10           20        30        40        50          
CGUAGCCUUACUUAUCUA---|   GG      CA           UC  A     UGGUAU 
                     CUGC  UAUGGC  CCCUUCGUCUG  CA CUGUC      \
                     GGCG  GUACUG  GGGAAGUAGAC  GU GAUAG      U
AAGCUAAUAAGCAUCGUGCAA^   G-      UC           C-  C     UUGAGC 
.       110       100         90        80         70
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Eba-Mir-22-P2_5p* (predicted)

mirBase accessionNone
Sequence
0- CACCCUUCGUCUGUCCAACUGUC -23
Get sequence
Mature sequence

Eba-Mir-22-P2_3p

mirBase accessionNone
Sequence
38- UAGCUGCCAGAUGAAGGGCUGU -60
Get sequence