MirGeneDB 3.0
MirGeneDB ID

Hru-Mir-22-P2

Family name MIR-22 (all species)
Seed AGCUGCC
Species Red Abalone (Haliotis rufescens)
MiRBase ID
Paralogues Hru-Mir-22-P1 
Orthologues Aae-Mir-22-P2  Aga-Mir-22-P2  Agr-Mir-22-P2  Asu-Mir-22-P2  Bfl-Mir-22-P2a  Bfl-Mir-22-P2b  Bfl-Mir-22-P2c  Bge-Mir-22-P2  Bla-Mir-22-P2a  Bla-Mir-22-P2b  Bla-Mir-22-P2c  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dlo-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Eba-Mir-22-P2  Esc-Mir-22-P2  Gpa-Mir-22-P2  Hme-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lhy-Mir-22-P2  Llo-Mir-22-P2  Lpo-Mir-22-P2f  Lpo-Mir-22-P2g  Lpo-Mir-22-P2h  Lpo-Mir-22-P2i  Mgi-Mir-22-P2  Mom-Mir-22-P2  Npo-Mir-22-P2  Ofu-Mir-22-P2j  Ofu-Mir-22-P2k  Ovu-Mir-22-P2  Pau-Mir-22-P2  Pca-Mir-22-P2  Pcr-Mir-22-P2l  Pcr-Mir-22-P2m  Pdu-Mir-22-P2  Pfl-Mir-22-P2  Pmi-Mir-22-P2  Pve-Mir-22-P2  Rph-Mir-22-P2  Sko-Mir-22-P2  Snu-Mir-22-P2  Spu-Mir-22-P2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2  Tur-Mir-22-P2  War-Mir-22-P2  Xbo-Mir-22-P2d  Xbo-Mir-22-P2e 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_023055435.1_xgHalRufe1.0.p_genomic_plus_traces)		 JALGQA010000015.1: 6470641-6470697 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCCUUCUGCAGCCUAGACUGUCCACCAUCGCUCUUCCUUUGGUCAGCUGUCUUGACACACCAAGAGCUGCCAAAUGAAGGGCUGUGGUUGGUGGUAACAUCAACACGGAAGGGAU
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Structure
        10          20        30        40        50         
GGUCCUUCUGCAGCCUAG--| UG  C     C       C     U    UG    GAC 
                    AC  UC ACCAU GCUCUUC UUUGG CAGC  UCUU   A
                    UG  GG UGGUG CGGGAAG AAACC GUCG  AGAA   C
UAGGGAAGGCACAACUACAA^ GU  U     U       U     -    --    CCA 
     110       100        90        80         70          60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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Star sequence

Hru-Mir-22-P2_5p*
mirBase accessionNone
Sequence 
0- CGCUCUUCCUUUGGUCAGCUGUCUU -25
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Mature sequence

Hru-Mir-22-P2_3p
mirBase accessionNone
Sequence 
35- GAGCUGCCAAAUGAAGGGCUGU -57
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