MirGeneDB 3.0
83 Haliotis rufescens microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Ha Ha
Hru-Bantam None BANTAM GAGAUCA None None JALGQA010000011.1 21773818 21773879 - Protostomia Protostomia No
Hru-Let-7 None LET-7 GAGGUAG None None JALGQA010000018.1 20624325 20624393 + Bilateria Bilateria No 1
Hru-Mir-1 None MIR-1 GGAAUGU None None JALGQA010000002.1 71361077 71361137 + Bilateria Bilateria No 1 1
Hru-Mir-2-o51 None MIR-2 AUCACAG None None JALGQA010000019.1 17033823 17033880 + H. rufescens Protostomia No 1
Hru-Mir-2-o52 None MIR-2 AUCACAG None None JALGQA010000019.1 17033972 17034029 + H. rufescens Protostomia No 1 1
Hru-Mir-2-o53 None MIR-2 AUCACAG None None JALGQA010000019.1 17034102 17034159 + H. rufescens Protostomia No 1
Hru-Mir-2-o54 None MIR-2 AUCACAG None None JALGQA010000019.1 17034273 17034331 + H. rufescens Protostomia No 1 1
Hru-Mir-2-o55 None MIR-2 CACAGCC None None JALGQA010000019.1 17033087 17033148 + H. rufescens Protostomia No
Hru-Mir-2-P12 None MIR-2 AUCACAG None None JALGQA010000019.1 17033706 17033763 + Lophotrochozoa Protostomia No 1
Hru-Mir-7 None MIR-7 GGAAGAC None None JALGQA010000001.1 85943714 85943772 - Bilateria Bilateria Unknown 1
Hru-Mir-8 None MIR-8 AAUACUG None None JALGQA010000013.1 11406604 11406664 + Bilateria Bilateria No 1
Hru-Mir-9 None MIR-9 CUUUGGU None None JALGQA010000001.1 86779108 86779169 + Bilateria Bilateria No 1
Hru-Mir-10-P1 None MIR-10 ACCCUGU None None JALGQA010000004.1 46349511 46349570 - Bilateria Eumetazoa Unknown 1
Hru-Mir-10-P2 None MIR-10 ACCCGUA None None JALGQA010000018.1 20623900 20623958 + Bilateria Eumetazoa Unknown
Hru-Mir-10-P3 None MIR-10 CCCUGAG None None JALGQA010000018.1 20644304 20644359 + Bilateria Eumetazoa No 1
Hru-Mir-10-P5 None MIR-10 UACCCUG None None JALGQA010000004.1 46892451 46892509 - Lophotrochozoa Eumetazoa No 1 1
Hru-Mir-10-P6 None MIR-10 UUACCCU None None JALGQA010000004.1 47418182 47418242 - Neotrochozoa Eumetazoa Unknown 1
Hru-Mir-12 None MIR-12 GAGUAUU None None JALGQA010000003.1 15756156 15756212 + Protostomia Protostomia Unknown 1
Hru-Mir-22-P1 None MIR-22 GCUGCCU None None JALGQA010000015.1 6470982 6471039 - Bilateria Bilateria No 1 1
Hru-Mir-22-P2 None MIR-22 AGCUGCC None None JALGQA010000015.1 6470641 6470697 - Bilateria Bilateria No 1
Hru-Mir-29-P1 None MIR-29 AGCACCA None None JALGQA010000023.1 6512892 6512951 - Bilateria Bilateria No 1 1
Hru-Mir-29-P2 None MIR-29 AGCACCA None None JALGQA010000023.1 6493865 6493921 - Bilateria Bilateria No 1
Hru-Mir-31 None MIR-31 GGCAAGA None None JALGQA010000002.1 3146529 3146590 + Bilateria Bilateria Unknown 1
Hru-Mir-33 None MIR-33 UGCAUUG None None JALGQA010000007.1 6957478 6957536 + Bilateria Bilateria No 1
Hru-Mir-34 None MIR-34 GGCAGUG None None JALGQA010000024.1 8020798 8020855 + Bilateria Bilateria Unknown 1
Hru-Mir-67 None MIR-67 CACAACC None None JALGQA010000015.1 13313867 13313924 - Protostomia Protostomia Yes
Hru-Mir-71 None MIR-71 GAAAGAC None None JALGQA010000019.1 17032907 17032964 + Bilateria Bilateria Unknown 1
Hru-Mir-76 None MIR-76 UCGUUGU None None JALGQA010000007.1 30148491 30148553 - Bilateria Bilateria No 1
Hru-Mir-87-P1 None MIR-87 UGAGCAA None None JALGQA010000010.1 16274339 16274397 - Protostomia Protostomia No 1
Hru-Mir-87-P2 None MIR-87 UGAGCAA None None JALGQA010000010.1 16273794 16273851 - Protostomia Protostomia No 1 1
Hru-Mir-92-o92 None MIR-92 AUUGCAC None None JALGQA010000014.1 5911876 5911932 + H. rufescens Bilateria No 1
Hru-Mir-92-o93 None MIR-92 AUUGCAC None None JALGQA010000014.1 5912798 5912858 + H. rufescens Bilateria No 1
Hru-Mir-92-o94 None MIR-92 AUUGCAC None None JALGQA010000014.1 5917110 5917167 + H. rufescens Bilateria No 1 1
Hru-Mir-92-o95 None MIR-92 AUUGCAC None None JALGQA010000014.1 5919490 5919546 + H. rufescens Bilateria No 1
Hru-Mir-96-P1h None MIR-96 UUGGCAC None None JALGQA010000005.1 37628522 37628580 + Mollusca Bilateria Unknown 1
Hru-Mir-96-P1i None MIR-96 UUUGGCA None None JALGQA010000002.1 5850784 5850843 - Mollusca Bilateria No 1
Hru-Mir-96-P2 None MIR-96 UUGGCAC None None JALGQA010000016.1 20461578 20461638 - Bilateria Bilateria Unknown 1 1
Hru-Mir-96-P3 None MIR-96 AUGGCAC None None JALGQA010000016.1 20462852 20462910 - Bilateria Bilateria Unknown 1
Hru-Mir-124 None MIR-124 AAGGCAC None None JALGQA010000002.1 45546777 45546833 + Bilateria Bilateria No 1
Hru-Mir-133 None MIR-133 UGGUCCC None None JALGQA010000002.1 71378516 71378579 + Bilateria Bilateria No 1 1
Hru-Mir-137 None MIR-137 AUUGCUU None None JALGQA010000002.1 14003426 14003485 + Bilateria Bilateria No 1
Hru-Mir-153 None MIR-153 UGCAUAG None None JALGQA010000010.1 15684730 15684789 - Bilateria Bilateria No 1
Hru-Mir-184-o5 None MIR-184 GGACGGA None None JALGQA010000014.1 18032507 18032564 - H. rufescens Bilateria No 1 1
Hru-Mir-184-o6 None MIR-184 GGACGGA None None JALGQA010000014.1 18030619 18030676 - H. rufescens Bilateria No 1 1
Hru-Mir-190 None MIR-190 GAUAUGU None None JALGQA010000014.1 4501139 4501198 - Bilateria Bilateria No 1
Hru-Mir-193-P1 None MIR-193 ACUGGCC None None JALGQA010000011.1 1100867 1100926 + Bilateria Bilateria No 1 1
Hru-Mir-193-P2 None MIR-193 AAUGCCC None None JALGQA010000011.1 1140061 1140121 + Bilateria Bilateria Yes 1
Hru-Mir-210-P23 None MIR-210 UGUGCGU None None JALGQA010000006.1 28697465 28697524 + H. rufescens Bilateria No 1
Hru-Mir-210-P24 None MIR-210 UGUGCGU None None JALGQA010000006.1 28646002 28646060 + H. rufescens Bilateria No 1
Hru-Mir-216-P1 None MIR-216 AAUAUCA None None JALGQA010000003.1 15754732 15754788 + Bilateria Bilateria No
Hru-Mir-216-P2d None MIR-216 AAUCUCA None None JALGQA010000003.1 15755123 15755181 + Lophotrochozoa Bilateria No 1 1
Hru-Mir-219 None MIR-219 GAUUGUC None None JALGQA010000008.1 1926308 1926366 - Bilateria Bilateria No 1
Hru-Mir-242-P3a None MIR-242 UGCGUAG None None JALGQA010000016.1 16932597 16932652 - H. rufescens Bilateria Unknown 1 1 1
Hru-Mir-242-P3b None MIR-242 UGCGUAG None None JALGQA010000016.1 16931077 16931132 - H. rufescens Bilateria Unknown 1 1 1
Hru-Mir-252-P1 None MIR-252 UAAGUAG None None JALGQA010000012.1 1914945 1915000 - Bilateria Bilateria Unknown 1 1
Hru-Mir-252-P2 None MIR-252 UAAGUAC None None JALGQA010000012.1 1902167 1902227 - Bilateria Bilateria Unknown 1
Hru-Mir-277 None MIR-277 AAAUGCA None None JALGQA010000024.1 8013843 8013905 + Protostomia Protostomia No 1 1
Hru-Mir-278 None MIR-278 CGGUGGG None None JALGQA010000021.1 5285856 5285912 - Bilateria Bilateria No 1
Hru-Mir-279 None MIR-279 GACUAGA None None JALGQA010000001.1 13045350 13045406 + Protostomia Protostomia No 1
Hru-Mir-281 None MIR-281 AGGGAGC None None JALGQA010000031.1 5778555 5778611 + Bilateria Bilateria No 1
Hru-Mir-315 None MIR-315 UUUGAUU None None JALGQA010000016.1 20364459 20364520 + Bilateria Bilateria No 1
Hru-Mir-317 None MIR-317 GAACACA None None JALGQA010000024.1 7998742 7998801 + Protostomia Protostomia No 1 1
Hru-Mir-375 None MIR-375 UUGUUCG None None JALGQA010000010.1 34490583 34490641 + Bilateria Bilateria No 1
Hru-Mir-750 None MIR-750 CAGAUCU None None JALGQA010000002.1 36159394 36159452 + Protostomia Protostomia No
Hru-Mir-1175 None MIR-1175 GUGGAGA None None JALGQA010000002.1 36169534 36169592 + Protostomia Protostomia No 1
Hru-Mir-1984-P1 None MIR-1984 GCCCUAU None None JALGQA010000013.1 5722214 5722269 - Gastropoda + Bivalvia + Scaphopoda Conchifera Unknown 1 1 1
Hru-Mir-1984-P2 None MIR-1984 GCCAUUU None None JALGQA010000013.1 5718775 5718831 - Gastropoda + Bivalvia + Scaphopoda Conchifera No 1
Hru-Mir-1986-P1 None MIR-1986 GGAUUUC None None JALGQA010000006.1 52828715 52828771 - H. rufescens Lophotrochozoa No 1
Hru-Mir-1986-P2 None MIR-1986 GGAUUUC None None JALGQA010000006.1 52827721 52827778 - H. rufescens Lophotrochozoa No 1
Hru-Mir-1988 None MIR-1988 GUGGUUU None None JALGQA010000010.1 9665708 9665765 - Gastropoda Gastropoda No 1
Hru-Mir-1989-P4a None MIR-1989 CAGCUGU None None JALGQA010000006.1 51473548 51473604 - H. rufescens Platytrochozoa Unknown 1 1
Hru-Mir-1989-P4b None MIR-1989 CAGCUGU None None JALGQA010000006.1 51636455 51636511 - H. rufescens Platytrochozoa Unknown 1 1
Hru-Mir-1990-P2 None MIR-1990 GGGACUA None None JALGQA010000006.1 52829075 52829131 - Lophotrochozoa Lophotrochozoa No 1 1
Hru-Mir-1992 None MIR-1992 CAGCAGU None None JALGQA010000004.1 53166576 53166639 + Platytrochozoa Platytrochozoa No 1
Hru-Mir-1993 None MIR-1993 AUUAUGC None None JALGQA010000002.1 73340609 73340668 - Protostomia Protostomia No 1
Hru-Mir-1994-P1 None MIR-1994 GAGACAG None None JALGQA010000042.1 3513498 3513556 + Mollusca Lophotrochozoa Unknown 1
Hru-Mir-1994-P2 None MIR-1994 GAGACAG None None JALGQA010000042.1 3514060 3514117 + Mollusca Lophotrochozoa No
Hru-Mir-2001 None MIR-2001 UGUGACC None None JALGQA010000012.1 1918026 1918084 - Bilateria Bilateria Unknown 1 1
Hru-Mir-2722 None MIR-2722 GGCGCCG None None JALGQA010000020.1 4292711 4292766 - Mollusca Mollusca No 1
Hru-Mir-12588 None MIR-12588 GUGAUAG None None gb|JALGQB010000184.1|:58662-58925 102 160 - Gastropoda Gastropoda No 1 1
Hru-Novel-2 None HRU-NOVEL-2 UUUUUAC None None JALGQA010000055.1 1701472 1701529 - H. rufescens H. rufescens No 1
Hru-Novel-3 None HRU-NOVEL-3 ACUCCCG None None gb|JALGQB010000024.1|:6030563-6030826 91 144 + H. rufescens H. rufescens Unknown 1
Hru-Novel-4 None HRU-NOVEL-4 GGUCAGU None None JALGQA010000021.1 12337555 12337613 - H. rufescens H. rufescens Unknown 1

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