MirGeneDB 3.0
MirGeneDB ID

Hru-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Red Abalone (Haliotis rufescens)
MiRBase ID
Paralogues Hru-Mir-216-P2d 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dlo-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_023055435.1_xgHalRufe1.0.p_genomic_plus_traces)		 JALGQA010000003.1: 15754732-15754788 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGAUUUUGCCAUUCUAAGCCUGGUUUCUUAAUAUCAGCUGGUAAUCCUGAGAGAUCCACGCCUCAGGAUGCUGACUGAUAUAUGGCAAACGGGUACUUGUAUUCCUCGUCACAAC
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Structure
        10          20         30        40        50        
ACAGAUUUUGCCAUUCUAA--|    G   -  UA       CU    A       AGAU 
                     GCCUG UUU CU  AUAUCAG  GGUA UCCUGAG    C
                     UGGGC AAA GG  UAUAGUC  UCGU AGGACUC    C
CAACACUGCUCCUUAUGUUCA^    -   C  UA       AG    -       CGCA 
     110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ha Ha
Mature sequence

Hru-Mir-216-P1_5p
mirBase accessionNone
Sequence 
0- UAAUAUCAGCUGGUAAUCCUGAG -23
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Star sequence

Hru-Mir-216-P1_3p*
mirBase accessionNone
Sequence 
35- CAGGAUGCUGACUGAUAUAUGG -57
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