MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-216-P2 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Hru-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Bilateria
Node of Origin (family) Nephrozoa
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087231.1: 9573457-9573516 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGAAUAAAGCAUAACCGGUGGCUUAGUCAAAUAUCAGCUGGUAAUUCUGGGCUGUUGUGAGUGACCCAGGAUUCUGGCUGGUAUGAGGCUACGUACUGGUAACGUCGCCUUUUUGCAC
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Structure
        10           20        30        40        50          
AAUGAAUAAAGCAUAAC---|    G U     AA        UG U         CUGUUG 
                    CGGUG C UAGUC  AUAUCAGC  G AAUUCUGGG      \
                    GUCAU G AUCGG  UAUGGUCG  C UUAGGACCC      U
CACGUUUUUCCGCUGCAAUG^    - C     AG        GU -         AGUGAG 
.       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sr Sr
Mature sequence

Dlo-Mir-216-P1_5p

mirBase accessionNone
Sequence
0- AAAUAUCAGCUGGUAAUUCUGGG -23
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Star sequence

Dlo-Mir-216-P1_3p*

mirBase accessionNone
Sequence
38- CAGGAUUCUGGCUGGUAUGAGG -60
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