MirGeneDB 3.0
MirGeneDB ID

Lgi-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Owl limpet (Lottia gigantea)
MiRBase ID lgi-mir-216b
Paralogues Lgi-Mir-216-P2d 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dlo-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Hru-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(Lotgi1)		 LOTGIsca_22: 805723-805780 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P1)		 Mir-216-P1 LOTGIsca_22: 805723-805780 [+] Ensembl
Mir-216-P2d LOTGIsca_22: 807335-807401 [+] Ensembl
Mir-12 LOTGIsca_22: 809271-809328 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUCCAAAAUGGUGGAGCACCUGGUUCUGUAAUAUCAGCUGGUAAUCCUGAGUUACUGAUUAUCUCAGGAUUUUGGUUGAUAUUAAACAAACAGGCUCGAUAUUCAACAGGCAGUUA
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Structure
        10        20          30        40        50         
AUUUCCAAAAUGGUGGAGCA--|   GUUCUG          UG U         UUACU 
                      CCUG      UAAUAUCAGC  G AAUCCUGAG     \
                      GGAC      AUUAUAGUUG  U UUAGGACUC     G
AUUGACGGACAACUUAUAGCUC^   AAACAA          GU -         UAUUA 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Lgi-Mir-216-P1_5p
mirBase accessionMIMAT0009589
Sequence 
0- UAAUAUCAGCUGGUAAUCCUGAG -23
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Star sequence

Lgi-Mir-216-P1_3p* (predicted)
mirBase accessionNone
Sequence 
36- CAGGAUUUUGGUUGAUAUUAAA -58
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