MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues Dma-Mir-216-P2 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dlo-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Hru-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(DMA_ASM399081)		 NC_046176.1: 6125840-6125925 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAACACUGCUGAUGGCUUCUGAUACGACCAAAUAUCAGCAGGUAAUUCUGGGCAAUAUUAUCCUUGAACUUGUUUCAAAUACAAGGAAGAACCCAGACUGCCGACUGGUAUCAGGCCGUGAGAAUGCCCACAUCCCCACACAUAU
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Structure
        10            20        30        40        50        60        70   
GAAACACUGCUGAUGGC----|   GA    A  AA       CA    AU      CAAUAUUAUCCUUGAACUU 
                     UUCU  UACG CC  AUAUCAG  GGUA  UCUGGG                   \
                     AAGA  GUGC GG  UAUGGUC  CCGU  AGACCC                   G
UAUACACACCCCUACACCCGU^   --    C  AC       AG    C-      AAGAAGGAACAUAAACUUU 
    140       130         120       110       100         90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Mature sequence

Dma-Mir-216-P1_5p
mirBase accessionNone
Sequence 
0- AAAUAUCAGCAGGUAAUUCUGGG -23
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Star sequence

Dma-Mir-216-P1_3p*
mirBase accessionNone
Sequence 
64- CAGACUGCCGACUGGUAUCAGG -86
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