MirGeneDB 3.0
MirGeneDB ID

Pdu-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Dumerils clam worm (Platynereis dumerilii)
MiRBase ID
Paralogues Pdu-Mir-216-P2d 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dlo-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Hru-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(GCA_026936325.1_EMBL_pdum_1.0)		 JAPTHN010000007.1: 46915861-46915922 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGCUCAUUUGUUUUAGUGACCGCUGGCCAAAUAUCAGCUGGUAAUUCUGAGUGGUUUGAUCUAGUCCUCAGGAUUCGAGCUGAUAUUGGGUCAUGGGUCUGGCUUUGCUUAUGUGCCGCA
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Structure
        10          20        30        40        50        60 
UUUGCUCAUUUGUUUUAGU--|   GC     A          GGU         UGGUUUG 
                     GACC  UGGCC AAUAUCAGCU   AAUUCUGAG       \
                     CUGG  ACUGG UUAUAGUCGA   UUAGGACUC       A
ACGCCGUGUAUUCGUUUCGGU^   GU     G          GC-         CUGAUCU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
24 24 24 24 24 36 36 36 36 36 48 48 48 48 48 6d 6d 6d 6d 72 72 72 72 72
Mature sequence

Pdu-Mir-216-P1_5p
mirBase accessionNone
Sequence 
0- AAAUAUCAGCUGGUAAUUCUGAG -23
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Star sequence

Pdu-Mir-216-P1_3p*
mirBase accessionNone
Sequence 
40- CAGGAUUCGAGCUGAUAUUGGG -62
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