MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-283
Paralogues Hme-Mir-216-P2 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dlo-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hru-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(Hmel_1)		 HE669534: 41197-41253 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P1)		 Mir-216-P1 HE669534: 41197-41253 [+] Ensembl
Mir-12 HE669534: 42572-42850 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUGAAAUUUAGAAAAUUCGACAUUAGACUAAAUAUCAGCUGGUAAUUCUGGGGUCGUUCACCCCCAGGUUAUCAGUUGGUAUAAAGUUGUGUGUCGCAUUACUUCGAACAAACAGA
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Structure
        10          20        30        40        50        
GAUGAAAUUUAGAAAAUU--|     UA    AA               U     GUCG 
                    CGACAU  GACU  AUAUCAGCUGGUAAU CUGGG    U
                    GCUGUG  UUGA  UAUGGUUGACUAUUG GACCC    U
AGACAAACAAGCUUCAUUAC^     UG    AA               -     CCAC 
     110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Mature sequence

Hme-Mir-216-P1_5p
mirBase accessionMIMAT0024969
Sequence 
0- AAAUAUCAGCUGGUAAUUCUGGG -23
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Star sequence

Hme-Mir-216-P1_3p*
mirBase accessionNone
Sequence 
35- CAGGUUAUCAGUUGGUAUAAAG -57
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