MirGeneDB ID | Dgr-Mir-216-P1 |
---|---|
Family name | MIR-216 (all species) |
Seed | AAUAUCA |
Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
MiRBase ID | |
Paralogues | Dgr-Mir-216-P2c |
Orthologues | Aae-Mir-216-P1 Aga-Mir-216-P1 Agr-Mir-216-P1 Asu-Mir-216-P1 Bge-Mir-216-P1 Cte-Mir-216-P1 Dan-Mir-216-P1 Dlo-Mir-216-P1 Dma-Mir-216-P1 Dme-Mir-216-P1 Dmo-Mir-216-P1 Dpu-Mir-216-P1 Dsi-Mir-216-P1 Dya-Mir-216-P1 Eba-Mir-216-P1 Efe-Mir-216-P1a Efe-Mir-216-P1b Esc-Mir-216-P1 Gpa-Mir-216-P1 Hme-Mir-216-P1 Hru-Mir-216-P1 Lan-Mir-216-P1e Lan-Mir-216-P1f Lgi-Mir-216-P1 Lhy-Mir-216-P1 Mgi-Mir-216-P1 Mom-Mir-216-P1 Ofu-Mir-216-P1 Pau-Mir-216-P1 Pca-Mir-216-P1 Pcr-Mir-216-P1 Pdu-Mir-216-P1 Pve-Mir-216-P1 Rph-Mir-216-P1 Sma-Mir-216-P1 Snu-Mir-216-P1 Tca-Mir-216-P1 War-Mir-216-P1 |
Node of Origin (locus) | Bilateria |
Node of Origin (family) | Nephrozoa |
Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000014.1: 1076465-1076535 [-] |
Precursor (pre-Mir +30nt flank) | CCUUACCAAAAAAUCUUCCUCAUCUGCGCCUAAUAUCAGCCGGUAAUUCUGAGACGUAAGUGGCAAGUAAGGCAAAACUCAGAAUUUCGACUGAUAUCUGGCUCUGGUGUAGUGUUUCUGCUUGCUUAAUAGet precursor sequence |
Structure | 10 20 30 40 50 60 CCUUACCAAAAAAUCUUC- -| UGC UA C U ACGUAAGUGGC CU CAUC GCC AUAUCAG CGG AAUUCUGAG A GA GUGG CGG UAUAGUC GCU UUAAGACUC A AUAAUUCGUUCGUCUUUGU U^ UCU UC A - AAAACGGAAUG . 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | CNNC at 3p(+17) |
Mature sequence | Dgr-Mir-216-P1_5p (predicted) |
mirBase accession | None |
Sequence |
0- UAAUAUCAGCCGGUAAUUCUGAG -23
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|
Star sequence | Dgr-Mir-216-P1_3p* (predicted) |
mirBase accession | None |
Sequence |
49- CAGAAUUUCGACUGAUAUCUGG -71
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