MirGeneDB 3.0

MirGeneDB ID

Dgr-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Dimorphilus gyrociliatus (Dimorphilus gyrociliatus)
MiRBase ID
Paralogues Dgr-Mir-216-P2c 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dlo-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Hru-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(GCA_904063045.1_Dgyrociliatus)
CAJFCJ010000014.1: 1076465-1076535 [-]
Precursor
(pre-Mir +30nt flank)
CCUUACCAAAAAAUCUUCCUCAUCUGCGCCUAAUAUCAGCCGGUAAUUCUGAGACGUAAGUGGCAAGUAAGGCAAAACUCAGAAUUUCGACUGAUAUCUGGCUCUGGUGUAGUGUUUCUGCUUGCUUAAUA
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Structure
        10         20         30        40        50        60     
CCUUACCAAAAAAUCUUC-  -|   UGC   UA       C   U         ACGUAAGUGGC 
                   CU CAUC   GCC  AUAUCAG CGG AAUUCUGAG           A
                   GA GUGG   CGG  UAUAGUC GCU UUAAGACUC           A
AUAAUUCGUUCGUCUUUGU  U^   UCU   UC       A   -         AAAACGGAAUG 
 .       120       110       100        90         80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Mature sequence

Dgr-Mir-216-P1_5p (predicted)

mirBase accessionNone
Sequence
0- UAAUAUCAGCCGGUAAUUCUGAG -23
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Star sequence

Dgr-Mir-216-P1_3p* (predicted)

mirBase accessionNone
Sequence
49- CAGAAUUUCGACUGAUAUCUGG -71
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