MirGeneDB 3.0

MirGeneDB ID

Dgr-Mir-216-P2c

Family name MIR-216 (all species)
Seed AAUCUCA
Species Dimorphilus gyrociliatus (Dimorphilus gyrociliatus)
MiRBase ID
Paralogues Dgr-Mir-216-P1 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Agr-Mir-216-P2c  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Cte-Mir-216-P2c  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Eba-Mir-216-P2c  Efe-Mir-216-P2c  Hme-Mir-216-P2  Isc-Mir-216-P2  Lhy-Mir-216-P2c  Llo-Mir-216-P2c  Mom-Mir-216-P2c  Npo-Mir-216-P2c  Obi-Mir-216-P2c  Ofu-Mir-216-P2c  Ovu-Mir-216-P2c  Pau-Mir-216-P2c  Pca-Mir-216-P2  Snu-Mir-216-P2c  Tca-Mir-216-P2  Tur-Mir-216-P2  War-Mir-216-P2c 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Nephrozoa
Genome context
(GCA_904063045.1_Dgyrociliatus)
CAJFCJ010000014.1: 1075923-1075987 [-]
Precursor
(pre-Mir +30nt flank)
AAAUGUGUGACGUACGUGUGCAUGUUCGUAUAAUCUCAGCUGGUAAACGUGACUCGAAAAACCUUGCCCUUAUCGCGCUACUCGCUGAGAUUACAUGAAUUUUAGCACCUUUUUCAUCUAACACG
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Structure
        10        20          30        40        50        60  
AAAUGUGUGACGUACGUG   AU--|     A          U    AA     CUCGAAAAA 
                  UGC    GUUCGU UAAUCUCAGC GGUA  CGUGA         C
                  ACG    UAAGUA AUUAGAGUCG UCAU  GCGCU         C
GCACAAUCUACUUUUUCC   AUUU^     C          C    C-     AUUCCCGUU 
   120       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Mature sequence

Dgr-Mir-216-P2c_5p (predicted)

mirBase accessionNone
Sequence
0- UAAUCUCAGCUGGUAAACGUGAC -23
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Star sequence

Dgr-Mir-216-P2c_3p* (predicted)

mirBase accessionNone
Sequence
43- CGCGCUACUCGCUGAGAUUACA -65
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