MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-216-P2c

Family name MIR-216 (all species)
Seed AAUCUCA
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Mir-216-P2d 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Agr-Mir-216-P2c  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Cte-Mir-216-P2c  Dan-Mir-216-P2  Dgr-Mir-216-P2c  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Eba-Mir-216-P2c  Efe-Mir-216-P2c  Hme-Mir-216-P2  Isc-Mir-216-P2  Lhy-Mir-216-P2c  Llo-Mir-216-P2c  Mom-Mir-216-P2c  Npo-Mir-216-P2c  Obi-Mir-216-P2c  Ofu-Mir-216-P2c  Pau-Mir-216-P2c  Pca-Mir-216-P2  Snu-Mir-216-P2c  Tca-Mir-216-P2  Tur-Mir-216-P2  War-Mir-216-P2c 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Nephrozoa
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01022029.1: 191981-192040 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAACCACUCUUUGAUUGACAGGUGCUUGUGUAAUCUCAGCUGGUAAUAUAUGAGUGGUUCAAUCUCUCACCGUUACUUGCUGUGGUUGAACUAUCACCUUGCCAAAACAUCUCAACNNNN
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Structure
        10          20        30        40        50          
AAACCACUCUUUGAUUGAC--|    CUU  G     U    U      AUA   GUGGUU 
                     AGGUG   GU UAAUC CAGC GGUAAU   UGA      \
                     UCCAC   CA GUUGG GUCG UCAUUG   ACU      C
NNNNCAACUCUACAAAACCGU^    UAU  A     U    U      CC-   CUCUAA 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Mature sequence

Ovu-Mir-216-P2c_5p
mirBase accessionNone
Sequence 
0- UAAUCUCAGCUGGUAAUAUAUGA -23
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Star sequence

Ovu-Mir-216-P2c_3p*
mirBase accessionNone
Sequence 
37- CACCGUUACUUGCUGUGGUUGAA -60
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