MirGeneDB 3.0

MirGeneDB ID

Ofu-Mir-216-P2c

Family name MIR-216 (all species)
Seed AAUCUCA
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-216-P1  Ofu-Mir-216-P2d 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Agr-Mir-216-P2c  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Cte-Mir-216-P2c  Dan-Mir-216-P2  Dgr-Mir-216-P2c  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Eba-Mir-216-P2c  Efe-Mir-216-P2c  Hme-Mir-216-P2  Isc-Mir-216-P2  Lhy-Mir-216-P2c  Llo-Mir-216-P2c  Mom-Mir-216-P2c  Npo-Mir-216-P2c  Obi-Mir-216-P2c  Ovu-Mir-216-P2c  Pau-Mir-216-P2c  Pca-Mir-216-P2  Snu-Mir-216-P2c  Tca-Mir-216-P2  Tur-Mir-216-P2  War-Mir-216-P2c 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Nephrozoa
Genome context
(GCA_903813345.2_Owenia)
CAIIXF020000008.1: 38328620-38328677 [+]
Precursor
(pre-Mir +30nt flank)
CUCCUAAUGAUAGAAAUAGGGGUAGUGUUUUAAUCUCAGCUGGUAAUUCGGAGUGUUACAGAUCCCCUUGUUGCCAGCAGGGGUUAAAGCAAUACCUGCAUGAACCCGCUAACCUCAC
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Structure
        10          20        30        40        50        
CUCCUAAUGAUAGAAAUAG--|    G            A         UC  AGUGUU 
                     GGGUA UGUUUUAAUCUC GCUGGUAAU  GG      A
                     UCCAU ACGAAAUUGGGG CGACCGUUG  CC      C
CACUCCAAUCGCCCAAGUACG^    A            A         UU  CCUAGA 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Ow Ow
Mature sequence

Ofu-Mir-216-P2c_5p

mirBase accessionNone
Sequence
0- UAAUCUCAGCUGGUAAUUCGGA -22
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Star sequence

Ofu-Mir-216-P2c_3p* (predicted)

mirBase accessionNone
Sequence
36- CUUGUUGCCAGCAGGGGUUAAA -58
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