MirGeneDB 2.1
41 microRNA genes with node of origin Daphnia
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Dma-Mir-2-o1 None MIR-2 AUCACAG None None NC_046175.1 6286723 6286816 - Daphnia Protostomia No
Dpu-Mir-2-o1 None MIR-2 AUCACAG None None DAPPUscaffold_32 69416 69503 - Daphnia Protostomia No
Dma-Mir-2-o2 None MIR-2 GAUAAUU None None NC_046178.1 1060033 1060091 - Daphnia Protostomia No 1
Dpu-Mir-2-o2 None MIR-2 AUCACAG None None DAPPUscaffold_77 78818 78876 - Daphnia Protostomia No 1
Dma-Mir-9-o15 None MIR-9 CUUUGGU None None NC_046179.1 9004931 9004991 - Daphnia Bilateria No 1 1 1
Dpu-Mir-9-o15 dpu-mir-9 MIR-9 CUUUGGU MIMAT0012671 None DAPPUscaffold_2 1526213 1526273 + Daphnia Bilateria No 1 1 1
Dma-Mir-9-o16 None MIR-9 CUUUGGU None None NC_046175.1 6286883 6286941 - Daphnia Bilateria No 1
Dpu-Mir-9-o16 None MIR-9 CUUUGGU None None DAPPUscaffold_32 69575 69633 - Daphnia Bilateria No 1
Dma-Mir-87-o5a None MIR-87 UGAGCAA None None NC_046176.1 6157349 6157434 - Daphnia Protostomia No 1
Dpu-Mir-87-o5a None MIR-87 UGAGCAA None None DAPPUscaffold_1 2190896 2190980 + Daphnia Protostomia No 1
Dma-Mir-87-o5b None MIR-87 UGAGCAA None None NC_046176.1 6157168 6157231 - Daphnia Protostomia No 1
Dpu-Mir-87-o5b None MIR-87 UGAGCAA None None DAPPUscaffold_1 2191079 2191142 + Daphnia Protostomia No 1
Dma-Mir-92-o46 None MIR-92 AUUGCAC None None NC_046181.1 7370656 7370733 - Daphnia Bilateria No 1
Dpu-Mir-92-o46 None MIR-92 AUUGCAC None None DAPPUscaffold_38 876143 876215 + Daphnia Bilateria No 1
Dma-Mir-92-o47 None MIR-92 AUUGCAC None None NC_046181.1 7370498 7370557 - Daphnia Bilateria No
Dpu-Mir-92-o47 dpu-mir-92 MIR-92 AUUGCAC None MIMAT0012672 DAPPUscaffold_38 876332 876391 + Daphnia Bilateria No
Dma-Mir-279-o1 None MIR-279 GACUAGA None None NC_046175.1 6287015 6287090 - Daphnia Protostomia No 1 1
Dpu-Mir-279-o1 None MIR-279 GACUAGA None None DAPPUscaffold_32 69703 69769 - Daphnia Protostomia No 1
Dma-Mir-279-o2 None MIR-279 GACUAGA None None NC_046175.1 6285937 6286000 - Daphnia Protostomia No 1
Dpu-Mir-279-o2 dpu-mir-279b MIR-279 GACUAGA None MIMAT0018923 DAPPUscaffold_32 68663 68726 - Daphnia Protostomia No 1
Dma-Mir-279-o3 None MIR-279 GACUAGA None None NC_046174.1 9091292 9091368 + Daphnia Protostomia No 1
Dpu-Mir-279-o3 None MIR-279 GACUAGA None None DAPPUscaffold_43 177095 177172 + Daphnia Protostomia No 1
Dma-Mir-279-o4 None MIR-279 GACUAGA None None NC_046174.1 9091763 9091828 + Daphnia Protostomia No 1 1
Dpu-Mir-279-o4 dpu-mir-279a MIR-279 GACUAGA None MIMAT0012654 DAPPUscaffold_43 177501 177567 + Daphnia Protostomia No 1 1
Dma-Mir-279-o5 None MIR-279 GACUAGA None None NC_046179.1 204663 204723 - Daphnia Protostomia No 1 1
Dpu-Mir-279-o5 None MIR-279 GACUAGA None None DAPPUscaffold_62 283702 283760 - Daphnia Protostomia No 1 1 1
Dma-Mir-279-o6 None MIR-279 GACUAGA None None NC_046182.1 2914774 2914845 + Daphnia Protostomia No
Dpu-Mir-279-o6 None MIR-279 GACUAGA None None DAPPUscaffold_63 523653 523745 - Daphnia Protostomia No
Dma-Novel-1 None DMA-NOVEL-1 GUGAUGU None None NC_046182.1 5639526 5639593 - Daphnia Daphnia No 1 1
Dpu-Novel-1 None DPU-NOVEL-1 GUGAUGU None None DAPPUscaffold_58 365534 365601 - Daphnia Daphnia No 1 1
Dma-Novel-2 None DMA-NOVEL-2 CUGGGUU None None NC_046174.1 2509619 2509677 + Daphnia Daphnia No 1
Dpu-Novel-2 None DPU-NOVEL-2 CUGGGUU None None DAPPUscaffold_24 361300 361359 - Daphnia Daphnia No 1
Dma-Novel-3 None DMA-NOVEL-3 UGCACUG None None NC_046183.1 5280622 5280684 + Daphnia Daphnia No
Dpu-Novel-3 None DPU-NOVEL-3 UGCACUG None None DAPPUscaffold_13 1740035 1740097 + Daphnia Daphnia No 1
Dma-Novel-4 None DMA-NOVEL-4 CUUGGUU None None NC_046174.1 2509231 2509290 + Daphnia Daphnia No 1 1
Dpu-Novel-4 None DPU-NOVEL-4 CUUGGUU None None DAPPUscaffold_24 361694 361754 - Daphnia Daphnia No 1 1
Dpu-Novel-5 None DPU-NOVEL-5 ACUGGGU None None DAPPUscaffold_24 361858 361920 - Daphnia Daphnia Unknown 1
Dma-Novel-5-v1 None DMA-NOVEL-5 ACUGGGU None None NC_046174.1 2509081 2509143 + Daphnia Daphnia No
Dma-Novel-5-v2 None DMA-NOVEL-5 CUGGGUA None None NC_046174.1 2509081 2509143 + Daphnia Daphnia No
Dma-Novel-6 None DMA-NOVEL-6 GGGGGAA None None NC_046175.1 6286446 6286507 - Daphnia Daphnia No
Dpu-Novel-6 None DPU-NOVEL-6 CACUGGG None None CAJVNM010000013.1:1301350-1301500 54 115 + Daphnia Daphnia No 1

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