MirGeneDB ID | Npo-Mir-1986 |
---|---|
Family name | MIR-1986 (all species) |
Seed | GGAUUUC |
Species | Chambered Nautilus (Nautilus pompilius) |
MiRBase ID | |
Paralogues | |
Orthologues | Agr-Mir-1986 Cte-Mir-1986 Eba-Mir-1986 Efe-Mir-1986 Hru-Mir-1986-P1 Hru-Mir-1986-P2 Lan-Mir-1986 Lgi-Mir-1986 Lhy-Mir-1986 Mgi-Mir-1986 Mom-Mir-1986 Obi-Mir-1986 Ofu-Mir-1986 Ovu-Mir-1986 Pdu-Mir-1986 Pve-Mir-1986-P3 Pve-Mir-1986-P4 Pve-Mir-1986-P5 Rph-Mir-1986 War-Mir-1986 |
Node of Origin (locus) | Lophotrochozoa |
Node of Origin (family) | Lophotrochozoa |
Genome context (GCA_018389105_NPO) |
JACATO010001038.1: 23639-23696 [+] Ensembl |
Precursor (pre-Mir +30nt flank) | GGUUCGUUCGCACGCAAAGGCGGAUUUGGCCGCGGGUCGUGGGAAUACCACAUUUCUACUGUAGAGUGGAUUUCCCAAGAUCCGUGAUCACGUCUAGACCGUCAGCCACCAACAUGACGet precursor sequence |
Structure | 10 20 30 40 50 GGUUCGUUCGCACGCAAA C--| U GC G UA AUUUCU GG GGAU UG CGCGGGUC UGGGAA CCAC A CC UCUG AC GUGCCUAG ACCCUU GGUG C CAGUACAACCACCGACUG AGA^ C UA A UA AGAUGU 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | CNNC at 3p(+17) |
Star sequence | Npo-Mir-1986_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CGCGGGUCGUGGGAAUACCACAUU -24
Get sequence
|
Mature sequence | Npo-Mir-1986_3p (predicted) |
mirBase accession | None |
Sequence |
36- UGGAUUUCCCAAGAUCCGUGAU -58
Get sequence
|