MirGeneDB 3.0

MirGeneDB ID

Npo-Mir-1986

Family name MIR-1986 (all species)
Seed GGAUUUC
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1986  Cte-Mir-1986  Eba-Mir-1986  Efe-Mir-1986  Hru-Mir-1986-P1  Hru-Mir-1986-P2  Lan-Mir-1986  Lgi-Mir-1986  Lhy-Mir-1986  Mgi-Mir-1986  Mom-Mir-1986  Obi-Mir-1986  Ofu-Mir-1986  Ovu-Mir-1986  Pdu-Mir-1986  Pve-Mir-1986-P3  Pve-Mir-1986-P4  Pve-Mir-1986-P5  Rph-Mir-1986  War-Mir-1986 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_018389105_NPO)
JACATO010001038.1: 23639-23696 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUUCGUUCGCACGCAAAGGCGGAUUUGGCCGCGGGUCGUGGGAAUACCACAUUUCUACUGUAGAGUGGAUUUCCCAAGAUCCGUGAUCACGUCUAGACCGUCAGCCACCAACAUGAC
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Structure
        10        20          30        40        50        
GGUUCGUUCGCACGCAAA  C--|   U  GC        G      UA    AUUUCU 
                  GG   GGAU UG  CGCGGGUC UGGGAA  CCAC      A
                  CC   UCUG AC  GUGCCUAG ACCCUU  GGUG      C
CAGUACAACCACCGACUG  AGA^   C  UA        A      UA    AGAUGU 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Star sequence

Npo-Mir-1986_5p* (predicted)

mirBase accessionNone
Sequence
0- CGCGGGUCGUGGGAAUACCACAUU -24
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Mature sequence

Npo-Mir-1986_3p (predicted)

mirBase accessionNone
Sequence
36- UGGAUUUCCCAAGAUCCGUGAU -58
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