MirGeneDB 3.0

MirGeneDB ID

Ofu-Mir-1986

Family name MIR-1986 (all species)
Seed CAGGGUC
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1986  Cte-Mir-1986  Eba-Mir-1986  Efe-Mir-1986  Hru-Mir-1986-P1  Hru-Mir-1986-P2  Lan-Mir-1986  Lgi-Mir-1986  Lhy-Mir-1986  Mgi-Mir-1986  Mom-Mir-1986  Npo-Mir-1986  Obi-Mir-1986  Ovu-Mir-1986  Pdu-Mir-1986  Pve-Mir-1986-P3  Pve-Mir-1986-P4  Pve-Mir-1986-P5  Rph-Mir-1986  War-Mir-1986 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_903813345.2_Owenia)
CAIIXF020000006.1: 29788995-29789048 [-]
Precursor
(pre-Mir +30nt flank)
GUAGUGGUGAAAAAAUUGGCAACGUACAGUCCAGGGUCCUGGGGAGGCCACGUGAAUAACUGUGGAUUUCCCAUGAUCCGUAACUGUAUGCUGCUUGAAUCUACUGGUGCAUGG
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Structure
        10          20        30        40        50      
GUAGUGGUGAAAAAAUU--|   A        CCA     C       G     UGA 
                   GGCA CGUACAGU   GGGUC UGGGGAG CCACG   A
                   UCGU GUAUGUCA   CCUAG ACCCUUU GGUGU   U
GGUACGUGGUCAUCUAAGU^   C        AUG     U       A     CAA 
  110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ow Ow
Mature sequence

Ofu-Mir-1986_5p

mirBase accessionNone
Sequence
0- CCAGGGUCCUGGGGAGGCCACG -22
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Star sequence

Ofu-Mir-1986_3p* (predicted)

mirBase accessionNone
Sequence
32- UGGAUUUCCCAUGAUCCGUAAC -54
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