MirGeneDB ID | Lan-Mir-1986 |
Family name |
MIR-1986 (all species) |
Seed |
GGAUUUC |
Species |
Lingula (Lingula anatina) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Cgi-Mir-1986
Cte-Mir-1986
Efe-Mir-1986
Lgi-Mir-1986
Npo-Mir-1986
Obi-Mir-1986
Ovu-Mir-1986
|
Node of Origin (locus) |
Lophotrochozoa
|
Node of Origin (family) |
Lophotrochozoa
|
Genome context (LinAna_1.0) |
LFEI01000037: 537094-537148 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
ACCAGUGACCCGUGACCAGGCGGCUACAUUCGAGGGUCCUGGGGAAGCCGCGGCUAAUGAGCGUGGAUUUCCCAUGAUCCGUAACUGUAGUAUGCUAGUGAUCGUCCAAUGACAU
Get precursor sequence
|
Structure | 10 20 30 40 50
ACCAGUGACCCGUGACCA- -| UUCGA C G GCUA
GGCG GCUACA GGGUC UGGGGAA CCGCG \
UCGU UGAUGU CCUAG ACCCUUU GGUGC A
UACAGUAACCUGCUAGUGA A^ CAAUG U A GAGU
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Lan-Mir-1986_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CGAGGGUCCUGGGGAAGCCGCG -22
Get sequence
|
Mature sequence |
Lan-Mir-1986_3p (predicted) |
mirBase accession | None |
Sequence |
33- UGGAUUUCCCAUGAUCCGUAAC -55
Get sequence
|