| MirGeneDB ID | Obi-Mir-1986 |
|---|
| Family name |
MIR-1986 (all species) |
|---|
| Seed |
GGAUUUC |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cgi-Mir-1986
Cte-Mir-1986
Efe-Mir-1986
Lan-Mir-1986
Lgi-Mir-1986
Npo-Mir-1986
Ovu-Mir-1986
|
|---|
| Node of Origin (locus) |
Lophotrochozoa
|
|---|
| Node of Origin (family) |
Lophotrochozoa
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ417771: 156786-156844 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CCAAUGUUGGAGACUAACGCUGAUUGCAAUCAUGGCUCAUGGGAAGAUCACACGUCACGUUAACUCGUGGAUUUCCCAAGAUCCGUGAUUACAAUCUGACUUCAUUCAAUCGAUUGUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCAAUGUUGGAGACUAACGCU--| C C A A A UCACG
GAUUG AAUCAUGG UC UGGGA GAUC CACG \
CUAAC UUAGUGCC AG ACCCU UUAG GUGC U
AGUGUUAGCUAACUUACUUCAGU^ A U A - - UCAAU
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Obi-Mir-1986_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAUGGCUCAUGGGAAGAUCACACG -24
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-1986_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UGGAUUUCCCAAGAUCCGUGAU -59
Get sequence
|
|---|
