MirGeneDB ID | War-Mir-1990-P2 |
Family name |
MIR-1990 (all species) |
Seed |
GUAAGUU |
Species |
Wirenia (Solenogaster) (Wirenia argentea) |
MiRBase ID |
|
Paralogues |
War-Mir-1990-P1
|
Orthologues |
Agr-Mir-1990-P2
Cte-Mir-1990-P2
Cte-Mir-1990-P2-as
Eba-Mir-1990-P2
Efe-Mir-1990-P2
Hru-Mir-1990-P2
Lan-Mir-1990-P2
Lgi-Mir-1990-P2
Mgi-Mir-1990-P2
Mom-Mir-1990-P2
Npo-Mir-1990-P2
Ofu-Mir-1990-P2
Pdu-Mir-1990-P2
Pdu-Mir-1990-P2-as
Pve-Mir-1990-P2a1
Pve-Mir-1990-P2a2
Pve-Mir-1990-P2b
Pve-Mir-1990-P2c
Pve-Mir-1990-P2d
Pve-Mir-1990-P2e
Rph-Mir-1990-P2
|
Node of Origin (locus) |
Lophotrochozoa
|
Node of Origin (family) |
Lophotrochozoa
|
Genome context (GCA_025802215.1_ASM2580221v1_Wirenia) |
WNLI01031899.1: 8850-8906 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGAUGACGUCACCAGAGUGCUGACAUGCGCAGUAAGUUGACUGAGUCCCAGGUGGUUACGAUUCCAGGGACUACGUCAACUUCUCGCGCAUGCCCAGCAAUGUGCAUCACGUUCGAU
Get precursor sequence
|
Structure | 10 20 30 40 50
CGAUGACGUCACCAGAG- A- -| U UG A UGGUU
UGCUG CAUGCGC AG AAGUUGAC AGUCCC GG \
ACGAC GUACGCG UC UUCAACUG UCAGGG CC A
UAGCUUGCACUACGUGUA CC C^ - CA A UUAGC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
War-Mir-1990-P2_5p |
mirBase accession | None |
Sequence |
0- AGUAAGUUGACUGAGUCCCAGG -22
Get sequence
|
Star sequence |
War-Mir-1990-P2_3p* |
mirBase accession | None |
Sequence |
35- AGGGACUACGUCAACUUCUCGC -57
Get sequence
|