MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-1990-P2

Family name MIR-1990 (all species)
Seed GGGACUA
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues Agr-Mir-1990-P1 
Orthologues Cte-Mir-1990-P2  Cte-Mir-1990-P2-as  Eba-Mir-1990-P2  Efe-Mir-1990-P2  Hru-Mir-1990-P2  Lan-Mir-1990-P2  Lgi-Mir-1990-P2  Mgi-Mir-1990-P2  Mom-Mir-1990-P2  Npo-Mir-1990-P2  Ofu-Mir-1990-P2  Pdu-Mir-1990-P2  Pdu-Mir-1990-P2-as  Pve-Mir-1990-P2a1  Pve-Mir-1990-P2a2  Pve-Mir-1990-P2b  Pve-Mir-1990-P2c  Pve-Mir-1990-P2d  Pve-Mir-1990-P2e  Rph-Mir-1990-P2  War-Mir-1990-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granula)		 JABBOT010000001.1: 14814051-14814107 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGCAGCUCGGCUACCCGGUAGGGCGUGCGCAGUAAGUUGACUGAGUCCCAGGUAGCUAGGCAUCCAGGGACUACGUCAACUUCUCGCGUAUACUUUACACAGCAACGGUCGCAAGCU
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Structure
        10          20        30         40        50        
GGCAGCUCGGCUACCCG--      CG     -| U        UG      A  UAGCU 
                   GUAGGG  UGCGC AG AAGUUGAC  AGUCCC GG     \
                   CAUUUC  AUGCG UC UUCAACUG  UCAGGG CC     A
UCGAACGCUGGCAACGACA      AU     C^ -        CA      A  UACGG 
     110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Le
Star sequence

Agr-Mir-1990-P2_5p*
mirBase accessionNone
Sequence 
0- AGUAAGUUGACUGAGUCCCAGG -22
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Mature sequence

Agr-Mir-1990-P2_3p
mirBase accessionNone
Sequence 
35- AGGGACUACGUCAACUUCUCGC -57
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